Struct seq_geom_parser::PiscemGeomDesc

pub struct PiscemGeomDesc {
    pub read1_desc: String,
    pub read2_desc: String,
}

This struct holds a piscem compatible description of the fragment geometry specification.

Fields

read1_desc: String

The piscem format specification for read 1.

read2_desc: String

The piscem format specification for read 2.

Implementations

impl PiscemGeomDesc

pub fn from_geom_pieces( geom_pieces_r1: &[GeomPiece], geom_pieces_r2: &[GeomPiece] ) -> Self

This constructor builds the piscem format descriptor for this fragment library from a slice of the constituent GeomPieces for read 1 (geom_pieces_r1) and a slice of the GeomPieces for read 2 (geom_pieces_r2).

Trait Implementations

impl AppendToCmdArgs for PiscemGeomDesc

fn append(&self, cmd: &mut Command)

Adds this piscem format geometry specification to the command given by cmd.

impl Debug for PiscemGeomDesc

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl PartialEq<PiscemGeomDesc> for PiscemGeomDesc

fn eq(&self, other: &PiscemGeomDesc) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for PiscemGeomDesc

impl StructuralEq for PiscemGeomDesc

impl StructuralPartialEq for PiscemGeomDesc