Crate righor 

Re-exports

pub use crate::shared::Generator;

pub use crate::vdj::model::EntrySequence;

pub use crate::shared::genes_matching;

pub use crate::shared::AlignmentParameters;

pub use crate::shared::AminoAcid;

pub use crate::shared::CategoricalFeature1;

pub use crate::shared::CategoricalFeature1g1;

pub use crate::shared::CategoricalFeature2;

pub use crate::shared::CategoricalFeature2g1;

pub use crate::shared::DAlignment;

pub use crate::shared::Dna;

pub use crate::shared::DnaLike;

pub use crate::shared::Gene;

pub use crate::shared::InferenceParameters;

pub use crate::shared::InsertionFeature;

pub use crate::shared::Model;

pub use crate::shared::Modelable;

pub use crate::shared::VJAlignment;

Modules

shared

Shared functionalities between VDJ and VJ (not related to alignment)

v_dj

Variation of the VDJ model for TCR beta chain and IGH heavy chain, where P(V,D,J) = P(V, J) * P(D | J)

vdj

VDJ model for TCR beta chain and IGH heavy chain

vj

VJ model for TCR alpha chain and IGH light chain