Struct parasailors::AlignmentStats

pub struct AlignmentStats {
    pub score: i64,
    pub num_matches: u64,
    pub num_positive_subs: u64,
    pub align_length: usize,
    pub query_end: usize,
    pub ref_end: usize,
}

Stores statistics from an alignment.

Fields

score: i64

The score according to the substitution matrix and gap penalty scheme used.

num_matches: u64

Number of exactly matching characters.

num_positive_subs: u64

Number of positively scoring character substitutions (this is the same as num_matches when used an identity matrix).

align_length: usize

The length of the found alignment.

query_end: usize

The starting index (0-based) of the alignment in the query (usually 0).

ref_end: usize

The starting index (0-based) of the alignment in the reference.