List of all items

Structs

• alignment::model::Model
• alignment::model::batch::BatchBuilder
• alignment::model::tag::TagDef
• alignment::model::tag::TagScanner
• alignment::scanner::bam::Scanner
• alignment::scanner::batch_iterator::BatchIterator
• alignment::scanner::batch_iterator::QueryBatchIterator
• alignment::scanner::cram::BatchIterator
• alignment::scanner::cram::CramQuery
• alignment::scanner::cram::CramRecords
• alignment::scanner::cram::QueryBatchIterator
• alignment::scanner::cram::Scanner
• alignment::scanner::sam::Scanner
• bbi::model::base::BigBedRecord
• bbi::model::base::BigWigRecord
• bbi::model::base::Model
• bbi::model::base::batch::BatchBuilder
• bbi::model::zoom::BBIZoomRecord
• bbi::model::zoom::Model
• bbi::model::zoom::batch::BatchBuilder
• bbi::scanner::batch_iterator::base::BigBedBatchIterator
• bbi::scanner::batch_iterator::base::BigBedQueryBatchIterator
• bbi::scanner::batch_iterator::base::BigWigBatchIterator
• bbi::scanner::batch_iterator::base::BigWigQueryBatchIterator
• bbi::scanner::batch_iterator::zoom::BBIZoomBatchIterator
• bbi::scanner::batch_iterator::zoom::BBIZoomQueryBatchIterator
• bbi::scanner::bbizoom::Scanner
• bbi::scanner::bigbed::Scanner
• bbi::scanner::bigwig::Scanner
• bed::model::Model
• bed::model::batch::BatchBuilder
• bed::model::field_def::FieldDef
• bed::model::schema::BedSchema
• bed::scanner::batch_iterator::BatchIterator
• bed::scanner::batch_iterator::QueryBatchIterator
• bed::scanner::bed::Scanner
• error::CapturedBacktrace
• gxf::model::Model
• gxf::model::attribute::AttributeDef
• gxf::model::attribute::AttributeScanner
• gxf::model::batch::BatchBuilder
• gxf::scanner::batch_iterator::BatchIterator
• gxf::scanner::batch_iterator::QueryBatchIterator
• gxf::scanner::gff::Scanner
• gxf::scanner::gtf::Scanner
• sequence::model::Model
• sequence::model::batch::BatchBuilder
• sequence::scanner::batch_iterator::query::BatchIterator
• sequence::scanner::batch_iterator::stream::BatchIterator
• sequence::scanner::fasta::Scanner
• sequence::scanner::fastq::Scanner
• util::query::BgzfChunkReader
• util::query::ByteRangeReader
• variant::model::Model
• variant::model::batch::BatchBuilder
• variant::model::genotype::GenotypeDef
• variant::model::genotype::SampleStructBuilder
• variant::model::genotype::SeriesStructBuilder
• variant::model::info::InfoDef
• variant::scanner::batch_iterator::BatchIterator
• variant::scanner::batch_iterator::QueryBatchIterator
• variant::scanner::bcf::Scanner
• variant::scanner::vcf::Scanner

Enums

• Select
• alignment::model::field::Field
• alignment::model::field::FieldBuilder
• alignment::model::tag::TagBuilder
• alignment::model::tag::TagType
• bbi::model::zoom::field::Field
• bbi::model::zoom::field::FieldBuilder
• bbi::scanner::BBIReader
• bed::model::field::Field
• bed::model::field::FieldBuilder
• bed::model::field_def::FieldBuilder
• bed::model::field_def::FieldType
• error::OxbowError
• gxf::model::attribute::AttributeBuilder
• gxf::model::attribute::AttributeType
• gxf::model::attribute::AttributeValue
• gxf::model::field::Field
• gxf::model::field::FieldBuilder
• sequence::model::field::Field
• sequence::model::field::FieldBuilder
• util::index::IndexType
• variant::model::batch::GenotypeBy
• variant::model::batch::GenotypeDataBuilder
• variant::model::field::Field
• variant::model::field::FieldBuilder
• variant::model::genotype::GenotypeBuilder
• variant::model::genotype::GenotypeType
• variant::model::info::InfoBuilder
• variant::model::info::InfoType

Traits

• alignment::model::field::Push
• batch::Push
• batch::RecordBatchBuilder
• bed::model::field::Push
• bed::model::field_def::Push
• gxf::model::attribute::Push
• gxf::model::field::Push
• sequence::model::field::Push
• variant::model::field::Push

Functions

• alignment::model::field::get_cigar
• bbi::model::base::field::bed_standard_autosql_fields
• bed::model::field_def::bed_standard_fields
• util::batches_to_ipc
• util::index::index_from_reader
• util::index::index_from_source_path
• util::index::partition_from_index

Type Aliases

• error::Result
• util::query::VirtualRange

Constants

• VERSION
• alignment::model::field::DEFAULT_FIELD_NAMES
• bbi::model::zoom::field::DEFAULT_FIELD_NAMES
• bed::model::schema::STANDARD_FIELD_NAMES
• gxf::model::field::DEFAULT_FIELD_NAMES
• sequence::model::field::FASTA_DEFAULT_FIELD_NAMES
• sequence::model::field::FASTQ_DEFAULT_FIELD_NAMES
• variant::model::field::DEFAULT_FIELD_NAMES
• variant::model::genotype::GT_ALLELE_TYPE
• variant::model::genotype::GT_PHASED_TYPE