[][src]Module needletail::bitkmer

Compact binary representations of nucleic acid kmers

Structs

BitNuclKmer

Functions

bitmer_to_bytes
canonical

Return the lexigraphically lowest of the BitKmer and its reverse complement and whether the returned kmer is the reverse_complement (true) or the original (false)

minimizer

Find the lexigraphically lowest substring of a given length in the BitKmer

reverse_complement

Reverse complement a BitKmer (reverses the sequence and swaps A<>T and G<>C)

Type Definitions

BitKmer
BitKmerSeq