List of all items

Structs

• dynamic_bwt::DynamicBWT
• msbwt_core::BWTRange
• rle_bplus_tree::RLEBPlusTree
• rle_bplus_tree::RLEBPlusTreeIterator
• rle_bplus_tree::RLEBPlusTreeRunIterator
• rle_bwt::RleBWT
• run_block_av_flat::RLEBlock

Traits

• msbwt_core::BWT

Functions

• bwt_converter::convert_to_vec
• bwt_converter::save_bwt_numpy
• bwt_converter::save_bwt_runs_numpy
• bwt_util::generate_offset_hashmap
• bwt_util::naive_bwt
• bwt_util::pairwise_bwt_merge
• bwt_util::pairwise_merge_iter
• dynamic_bwt::create_from_fastx
• string_util::convert_itos
• string_util::convert_stoi
• string_util::reverse_complement_i

Constants

• msbwt_core::COUNT_MASK
• msbwt_core::LETTER_BITS
• msbwt_core::MASK
• msbwt_core::NUMBER_BITS
• msbwt_core::NUM_POWER
• msbwt_core::VC_LEN
• run_block_av_flat::MAX_BLOCK_SIZE
• run_block_av_flat::VC_LEN
• string_util::COMPLEMENT_INT
• string_util::INT_TO_STRING
• string_util::STRING_TO_INT