List of all items

Structs

• BuildOpts
• CallOpts
• FindOpts
• MapOpts
• MatchOpts
• format::RLE
• variant_calling::ResolveVariantErr
• variant_calling::Variant

Functions

• build
• call
• derandomize::derandomize_ms_val
• derandomize::derandomize_ms_vec
• derandomize::log_rm_max_cdf
• derandomize::random_match_threshold
• find
• format::relative_to_ref
• format::run_lengths
• format::run_lengths_gapped
• gap_filling::fill_gaps
• gap_filling::left_extend_kmer
• gap_filling::left_extend_over_gap
• gap_filling::nearest_unique_context
• index::build_sbwt_from_vecs
• index::load_sbwt
• index::query_sbwt
• index::serialize_sbwt
• map
• matches
• translate::add_variants
• translate::translate_ms_val
• translate::translate_ms_vec
• variant_calling::call_variants
• variant_calling::resolve_variant