List of all items
Structs
Functions
- absolute_path
- align_seqs
- align_seqs_quick
- align_to_chr
- alignment_stat
- basename
- build_range_of_part
- chr_to_align
- chrs_in_sets
- fill_up_m
- fill_up_s
- get_consensus_poa
- get_seq_faidx
- get_subs
- indel_intspan
- json2set
- json2set_m
- next_axt_block
- next_fas_block
- next_maf_block
- pair_d
- parse_axt_block
- parse_fas_block
- parse_maf_block
- polarize_subs
- read_first_column
- read_json
- read_lines
- read_replaces
- read_sizes
- reader
- seq_intspan
- set2json
- set2json_m
- sort_links
- trim_complex_indel
- trim_head_tail
- trim_outgroup
- trim_pure_dash
- write_json
- write_lines
- writer