illumina_coordinates

Struct SequenceIdentifier

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pub struct SequenceIdentifier {
Show 13 fields
    pub sequencer_id: String,
    pub run_count: u16,
    pub flow_cell_id: String,
    pub lane: u8,
    pub side: u8,
    pub swath: u8,
    pub tile: u8,
    pub x: u16,
    pub y: u16,
    pub read: u8,
    pub is_filtered: bool,
    pub control_number: u8,
    pub sample: Sample,

}
Expand description

A parsed sequence identifier

Fields§

§sequencer_id: String

ID of the sequencing machine

§run_count: u16

The number of sequencing runs this machine has performed

§flow_cell_id: String

ID of the flow cell, printed on the side of the glass slide

§lane: u8

Lane number. For MiSeqs, this is always 1

§side: u8

The near or far side off the flow cell surface

§swath: u8

The row within a lane, if wide enough. For MiSeqs, this is always 1

§tile: u8

The positional order of the region where the cluster is located

§x: u16

The x-coordinate of the cluster

§y: u16

The y-coordinate of the cluster

§read: u8

The read number

§is_filtered: bool

Whether the read was filtered for low quality (Y=filtered)

§control_number: u8

Indicates the type of control, 0 = not a control read

§sample: Sample

Number from sample sheet, or the sequence if the read is in Undetermined Reads

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