List of all items
Structs
- bamqc::BamQcResult
- stream::CountRecord
- stream::UniwigStreamProcessor
- stream::WigWriter
- utils::Chromosome
Enums
Functions
- bamqc::compute_bam_qc
- bamqc::compute_bam_qc_parallel
- bamqc::run_bam_qc
- bamqc::run_bam_qc_parallel
- bamqc::write_bam_qc_tsv
- counting::bam_to_bed_no_counts
- counting::core_counts
- counting::fixed_core_counts_bam_to_bw
- counting::fixed_start_end_counts_bam
- counting::fixed_start_end_counts_bam_to_bw
- counting::get_shifted_pos
- counting::start_end_counts
- counting::variable_core_counts_bam_to_bw
- counting::variable_shifted_bam_to_bw
- counting::variable_start_end_counts_bam_to_bw
- create_bw_writer
- reading::create_chrom_vec_default_score
- reading::create_chrom_vec_scores
- reading::parse_bedlike_file_with_scores
- reading::read_bam_header
- reading::read_chromosome_sizes
- stream::read_chrom_sizes
- stream::uniwig_streaming
- stream::write_records_as_bedgraph
- stream::write_records_as_wig
- uniwig_main
- utils::clamped_start_position
- utils::clamped_start_position_zero_pos
- utils::compress_counts
- utils::get_final_chromosomes
- utils::npy_to_wig
- utils::read_u32_npy
- utils::version_sort
- writing::write_bw_files
- writing::write_combined_files
- writing::write_to_bed_graph_file
- writing::write_to_npy_file
- writing::write_to_wig_file
- writing::write_to_wig_file_variable