List of all items

Structs

• arg::Cli
• arg::Summarise
• arg::Tune

Enums

• arg::Commands

Functions

• initialise::convert_iupac_to_regex
• initialise::create_reader
• initialise::create_writer
• initialise::open_file
• initialise::parse_patterns_file
• inverted::run_inverted
• output::create_sqlite_db
• output::create_sqlite_db_with_quality
• output::write_full_record
• output::write_record_with_fasta
• output::write_record_with_id
• output::write_regex_to_db
• quality::average_quality
• quality::canonical_tetranucleotide_frequencies
• quality::gc_content
• quality::tetranucleotide_frequencies
• summarise::run_summarise
• tune::run_tune

Statics

• quality::CANONICAL_K_MERS