List of all items

Structs

• command::test::TestResult
• config::types::Author
• config::types::Config
• config::types::File
• config::types::Language
• config::types::TestFile
• config::types::Testing
• config::types::Workflow
• config::types::Zenodo
• raw_url::RawUrl
• trs::api::TrsEndpoint
• trs::response::TrsResponse
• trs::types::Checksum
• trs::types::FileWrapper
• trs::types::ImageData
• trs::types::Organization
• trs::types::ServiceInfo
• trs::types::ServiceType
• trs::types::Tool
• trs::types::ToolClass
• trs::types::ToolFile
• trs::types::ToolVersion
• wes::AttachedFile

Enums

• args::Args
• config::io::FileExt
• config::types::FileType
• config::types::LanguageType
• config::types::TestFileType
• raw_url::UrlType
• trs::types::DescriptorType
• trs::types::DescriptorTypeWithPlain
• trs::types::FileType
• trs::types::ImageType
• wes::RunStatus

Functions

• command::make_template::make_template
• command::make_template::obtain_wf_files
• command::publish::publish
• command::test::check_test_results
• command::test::test
• command::validate::validate
• command::validate::validate_and_update_workflow
• command::validate::validate_authors
• command::validate::validate_language
• command::validate::validate_wf_name
• config::io::find_config_loc_recursively_from_trs
• config::io::parse_file_ext
• config::io::read_config
• config::io::write_config
• env::gh_actions_url
• env::github_token
• env::in_ci
• env::sapporo_run_dir
• github_api::create_branch
• github_api::create_commit
• github_api::create_empty_branch
• github_api::create_ref
• github_api::create_tree
• github_api::exists_branch
• github_api::get_author_info
• github_api::get_branch_sha
• github_api::get_branches
• github_api::get_contents
• github_api::get_default_branch
• github_api::get_file_list_recursive
• github_api::get_latest_commit_sha
• github_api::get_readme_url
• github_api::get_ref
• github_api::get_repos
• github_api::get_request
• github_api::get_user
• github_api::parse_repo
• github_api::patch_request
• github_api::post_request
• github_api::update_ref
• inspect::check_by_regexp
• inspect::check_by_shebang
• inspect::inspect_cwl_version
• inspect::inspect_nfl_version
• inspect::inspect_smk_version
• inspect::inspect_wdl_version
• inspect::inspect_wf_type
• inspect::inspect_wf_type_version
• inspect::inspect_wf_version
• logger::init_logger
• raw_url::is_commit_hash
• remote::fetch_json_content
• remote::fetch_raw_content
• trs::api::get_request
• trs::api::get_service_info
• trs::api::get_tool
• trs::api::get_tool_classes
• trs::api::get_tools
• trs::response::generate_descriptor
• trs::response::generate_files
• trs::response::generate_tests
• trs::response::generate_tool_classes
• trs::types::serialize_date_time
• wes::check_wes_running
• wes::default_wes_location
• wes::get_run_log
• wes::get_run_status
• wes::get_supported_wes_versions
• wes::inside_docker_container
• wes::post_run
• wes::sapporo_health_check
• wes::start_wes
• wes::stop_wes
• wes::test_case_to_form
• wes::wf_attachment
• wes::wf_url