Module gfa::gfa[][src]

Re-exports

pub use self::orientation::*;
pub use self::traits::*;

Modules

name_conversion
orientation
traits

Structs

Containment
GFA

This module defines the various GFA line types, the GFA object, and some utility functions and types. Simple representation of a parsed GFA file, using a Vec to store each separate GFA line type.

Header

The header line of a GFA graph

Link
Path

The step list that the path actually consists of is an unparsed Vec to keep memory down; use path.iter() to get an iterator over the parsed path segments and orientations.

Segment

A segment in a GFA graph. Generic over the name type, but currently the parser is only defined for N = Vec

Enums

Line

Enum containing the different kinds of GFA lines.

LineRef