[−][src]Function fmlrc::ropebwt2_util::create_bwt_from_strings

pub fn create_bwt_from_strings(data: &[&str]) -> Result<String, Box<dyn Error>>

Wrapper function for using ropebwt2 with collection of strings. This is primarily for performing easy tests within the Rust environment. For production, we recommend running the ropebwt2 command separately. IMPORTANT: This requires that ropebwt2 is installed locally and on the PATH.

Arguments

data - a string instance where individual strings are separated by newline characters ('\n')

Examples

use fmlrc::ropebwt2_util::create_bwt_from_strings;
let data: Vec<&str> = vec!["CCGT", "ACG"];
assert_eq!(create_bwt_from_strings(&data).unwrap(), "GT$$ACCCG\n".to_string());