| get_nodes | Fetch from the database the nodes that correspond to the given terms
and return them. If any of the term does not correspond to a Node, an
error is returned.
|
| make_lineages | Make the lineage for each of the given terms. If any of them does not
correspond to a Node, an error is returned.
|
| make_subtree | Make the subtree with the Node corresponding to the given term as root,
or return an error if no Node is found.
If species is true, then doesn't include nodes below species (such as
subspecies) in the resulting tree.
|
| make_tree | Make the tree with the Root as root and the Nodes corresponding to
the given terms as leaves. If any of them does not correspond to
a Node, an error is returned.
|
| populate_db | Populate the local taxonomy DB at datadir while sending email
to the NCBI FTP servers.
|