Crate sir_ddft

This crate contains solvers for the SIR model, the spatial SIR model extension including diffusion and a novel SIR model based on dynamical density functional theory.

Usage

Basic usage follows the same pattern for all models:

// Setup parameters and initial state
let params = SIRParameters::new(0.5, 0.1);
let state = SIRState::new(0.998, 0.002, 0.);
// Create the IVP and solver
let mut ivp = SIRODEIVP::new(params, state);
let solver = RKF45Solver::<SIRODEIVP>::new();
// Integrate for some time
ivp.add_time(2.0);
solver.integrate(&mut ivp);
// Retrieve the result
let (t,state) = ivp.get_result();

Modules

ode	ODE solvers

Structs

CartesianGrid2D	A 2D Cartesian grid, i.e. the Cartesian product of two 1D grids
CartesianGrid2DIterator	Iterator over a 2D Cartesian grid
EquidistantGrid1D	Equidistant grid in 1D starting at xlim.0 and ending at xlim.1
EquidistantGrid1DIter	Iterator over 1D equidistant grid (workaround until generators are stable)
SIRDDFT1DIVP	Initial value problem for the SIR-DDFT model in one spatial dimension
SIRDDFT2DIVP	Initial value problem for the SIR-DDFT model in two spatial dimensions
SIRDDFTParameters	Additional parameters for the SIR DDFT model
SIRDiffusion1DIVP	Initial value problem for the SIR model with diffusion in one spatial dimension
SIRDiffusion2DIVP	Initial value problem for the SIR model with diffusion in two spatial dimensions
SIRDiffusionParameters	Additional parameters for the SIR model with diffusion
SIRODEIVP	Initial value problem for the SIR model
SIRParameters	Parameters for the most simplistic SIR model (ODE)
SIRState	State of the SIR model (SIR ODE)
SIRStateSpatial1D	State of spatially resolved SIR models in one dimension (SIR PDEs)
SIRStateSpatial1DBorrowed	Borrowed view of a SIRStateSpatial1D
SIRStateSpatial2D	State of spatially resolved SIR models in two dimensions (SIR PDEs)
SIRStateSpatial2DBorrowed	Borrowed view of a SIRStateSpatial2D

Enums

Grid1D	Types of one-dimensional grids.
Grid2D	Types of two-dimensional grids.