Struct seq_geom_parser::SalmonSeparateGeomDesc

pub struct SalmonSeparateGeomDesc {
    pub barcode_desc: String,
    pub umi_desc: String,
    pub read_desc: String,
}

This struct holds a salmon compatible description of the fragment geometry specification.

Fields

barcode_desc: String

umi_desc: String

read_desc: String

Implementations

impl SalmonSeparateGeomDesc

pub fn from_geom_pieces( geom_pieces_r1: &[GeomPiece], geom_pieces_r2: &[GeomPiece] ) -> Self

Trait Implementations

impl AppendToCmdArgs for SalmonSeparateGeomDesc

fn append(&self, cmd: &mut Command)

Given the salmon compatible geometry description, append this description to the command cmd, assumed to be an invocation of salmon alevin.

impl Debug for SalmonSeparateGeomDesc

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl PartialEq<SalmonSeparateGeomDesc> for SalmonSeparateGeomDesc

fn eq(&self, other: &SalmonSeparateGeomDesc) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for SalmonSeparateGeomDesc

impl StructuralEq for SalmonSeparateGeomDesc

impl StructuralPartialEq for SalmonSeparateGeomDesc