var searchIndex = {}; searchIndex["rust_htslib"] = {"doc":"Rust-HTSlib provides a high level BAM API.\nReading and writing BAM files is as easy as","items":[[0,"htslib","rust_htslib","",null,null],[3,"Struct___kstring_t","rust_htslib::htslib","",null,null],[12,"l","","",0,null],[12,"m","","",0,null],[12,"s","","",0,null],[3,"Struct_htsFormat","","",null,null],[12,"category","","",1,null],[12,"format","","",1,null],[12,"version","","",1,null],[12,"compression","","",1,null],[12,"compression_level","","",1,null],[12,"specific","","",1,null],[3,"Struct_Unnamed1","","",null,null],[12,"major","","",2,null],[12,"minor","","",2,null],[3,"Struct_Unnamed2","","",null,null],[12,"isbin_isright_isbe_iscram_dummy","","",3,null],[12,"lineno","","",3,null],[12,"line","","",3,null],[12,"_fn","","",3,null],[12,"fn_aux","","",3,null],[12,"fp","","",3,null],[12,"format","","",3,null],[3,"Union_Unnamed3","","",null,null],[12,"_bindgen_data_","","",4,null],[3,"Struct_Unnamed4","","",null,null],[12,"u","","",5,null],[12,"v","","",5,null],[3,"Struct_Unnamed5","","",null,null],[12,"readres_finished_dummy","","",6,null],[12,"tid","","",6,null],[12,"beg","","",6,null],[12,"end","","",6,null],[12,"n_off","","",6,null],[12,"i","","",6,null],[12,"curr_tid","","",6,null],[12,"curr_beg","","",6,null],[12,"curr_end","","",6,null],[12,"curr_off","","",6,null],[12,"off","","",6,null],[12,"readrec","","",6,null],[12,"bins","","",6,null],[3,"Struct_Unnamed6","","",null,null],[12,"n","","",7,null],[12,"m","","",7,null],[12,"a","","",7,null],[3,"Struct_Unnamed7","","",null,null],[12,"n_targets","","",8,null],[12,"ignore_sam_err","","",8,null],[12,"l_text","","",8,null],[12,"target_len","","",8,null],[12,"cigar_tab","","",8,null],[12,"target_name","","",8,null],[12,"text","","",8,null],[12,"sdict","","",8,null],[3,"Struct_Unnamed8","","",null,null],[12,"tid","","",9,null],[12,"pos","","",9,null],[12,"bin","","",9,null],[12,"qual","","",9,null],[12,"l_qname","","",9,null],[12,"flag","","",9,null],[12,"n_cigar","","",9,null],[12,"l_qseq","","",9,null],[12,"mtid","","",9,null],[12,"mpos","","",9,null],[12,"isize","","",9,null],[3,"Struct_Unnamed9","","",null,null],[12,"core","","",10,null],[12,"l_data","","",10,null],[12,"m_data","","",10,null],[12,"data","","",10,null],[12,"id","","",10,null],[3,"Struct_Unnamed10","","",null,null],[12,"b","","",11,null],[12,"qpos","","",11,null],[12,"indel","","",11,null],[12,"level","","",11,null],[12,"isdel_ishead_istail_isrefskip_isaux","","",11,null],[4,"Struct_BGZF","","",null,null],[4,"Struct_cram_fd","","",null,null],[4,"Struct_hFILE","","",null,null],[4,"Struct___hts_idx_t","","",null,null],[4,"Struct___bam_plp_t","","",null,null],[4,"Struct___bam_mplp_t","","",null,null],[5,"bgzf_close","","",null,null],[7,"hts_verbose","","",null,null],[7,"seq_nt16_table","","",null,null],[7,"seq_nt16_str","","",null,null],[7,"seq_nt16_int","","",null,null],[5,"bgzf_open","","",null,null],[5,"hts_version","","",null,null],[5,"hts_detect_format","","",null,null],[5,"hts_format_description","","",null,null],[5,"hts_open","","",null,null],[5,"hts_hopen","","",null,null],[5,"hts_close","","",null,null],[5,"hts_get_format","","",null,null],[5,"hts_set_opt","","",null,null],[5,"hts_getline","","",null,null],[5,"hts_readlines","","",null,null],[5,"hts_readlist","","",null,null],[5,"hts_set_threads","","",null,null],[5,"hts_set_fai_filename","","",null,null],[5,"hts_idx_init","","",null,null],[5,"hts_idx_destroy","","",null,null],[5,"hts_idx_push","","",null,null],[5,"hts_idx_finish","","",null,null],[5,"hts_idx_save","","",null,null],[5,"hts_idx_load","","",null,null],[5,"hts_idx_get_meta","","",null,null],[5,"hts_idx_set_meta","","",null,null],[5,"hts_idx_get_stat","","",null,null],[5,"hts_idx_get_n_no_coor","","",null,null],[5,"hts_parse_reg","","",null,null],[5,"hts_itr_query","","",null,null],[5,"hts_itr_destroy","","",null,null],[5,"hts_itr_querys","","",null,null],[5,"hts_itr_next","","",null,null],[5,"hts_idx_seqnames","","",null,null],[5,"hts_file_type","","",null,null],[5,"bam_hdr_init","","",null,null],[5,"bam_hdr_read","","",null,null],[5,"bam_hdr_write","","",null,null],[5,"bam_hdr_destroy","","",null,null],[5,"bam_name2id","","",null,null],[5,"bam_hdr_dup","","",null,null],[5,"bam_init1","","",null,null],[5,"bam_destroy1","","",null,null],[5,"bam_read1","","",null,null],[5,"bam_write1","","",null,null],[5,"bam_copy1","","",null,null],[5,"bam_dup1","","",null,null],[5,"bam_cigar2qlen","","",null,null],[5,"bam_cigar2rlen","","",null,null],[5,"bam_endpos","","",null,null],[5,"bam_str2flag","","",null,null],[5,"bam_flag2str","","",null,null],[5,"bam_index_build","","",null,null],[5,"sam_index_load","","",null,null],[5,"sam_itr_queryi","","",null,null],[5,"sam_itr_querys","","",null,null],[5,"sam_open_mode","","",null,null],[5,"sam_hdr_parse","","",null,null],[5,"sam_hdr_read","","",null,null],[5,"sam_hdr_write","","",null,null],[5,"sam_parse1","","",null,null],[5,"sam_format1","","",null,null],[5,"sam_read1","","",null,null],[5,"sam_write1","","",null,null],[5,"bam_aux_get","","",null,null],[5,"bam_aux2i","","",null,null],[5,"bam_aux2f","","",null,null],[5,"bam_aux2A","","",null,null],[5,"bam_aux2Z","","",null,null],[5,"bam_aux_append","","",null,null],[5,"bam_aux_del","","",null,null],[5,"bam_plp_init","","",null,null],[5,"bam_plp_destroy","","",null,null],[5,"bam_plp_push","","",null,null],[5,"bam_plp_next","","",null,null],[5,"bam_plp_auto","","",null,null],[5,"bam_plp_set_maxcnt","","",null,null],[5,"bam_plp_reset","","",null,null],[5,"bam_mplp_init","","",null,null],[5,"bam_mplp_init_overlaps","","",null,null],[5,"bam_mplp_destroy","","",null,null],[5,"bam_mplp_set_maxcnt","","",null,null],[5,"bam_mplp_auto","","",null,null],[11,"clone","","",0,null],[11,"default","","",0,{"inputs":[],"output":{"name":"struct___kstring_t"}}],[11,"clone","","",1,null],[11,"default","","",1,{"inputs":[],"output":{"name":"struct_htsformat"}}],[11,"clone","","",2,null],[11,"default","","",2,{"inputs":[],"output":{"name":"struct_unnamed1"}}],[11,"clone","","",3,null],[11,"default","","",3,{"inputs":[],"output":{"name":"struct_unnamed2"}}],[11,"clone","","",4,null],[11,"bgzf","","",4,null],[11,"cram","","",4,null],[11,"hfile","","",4,null],[11,"voidp","","",4,null],[11,"default","","",4,{"inputs":[],"output":{"name":"union_unnamed3"}}],[11,"clone","","",5,null],[11,"default","","",5,{"inputs":[],"output":{"name":"struct_unnamed4"}}],[11,"clone","","",6,null],[11,"default","","",6,{"inputs":[],"output":{"name":"struct_unnamed5"}}],[11,"clone","","",7,null],[11,"default","","",7,{"inputs":[],"output":{"name":"struct_unnamed6"}}],[11,"clone","","",8,null],[11,"default","","",8,{"inputs":[],"output":{"name":"struct_unnamed7"}}],[11,"clone","","",9,null],[11,"default","","",9,{"inputs":[],"output":{"name":"struct_unnamed8"}}],[11,"clone","","",10,null],[11,"default","","",10,{"inputs":[],"output":{"name":"struct_unnamed9"}}],[11,"clone","","",11,null],[11,"default","","",11,{"inputs":[],"output":{"name":"struct_unnamed10"}}],[0,"vcf","","",null,null],[3,"Struct___kstring_t","rust_htslib::htslib::vcf","",null,null],[12,"l","","",12,null],[12,"m","","",12,null],[12,"s","","",12,null],[3,"Struct_htsFormat","","",null,null],[12,"category","","",13,null],[12,"format","","",13,null],[12,"version","","",13,null],[12,"compression","","",13,null],[12,"compression_level","","",13,null],[12,"specific","","",13,null],[3,"Struct_Unnamed1","","",null,null],[12,"major","","",14,null],[12,"minor","","",14,null],[3,"Struct_Unnamed2","","",null,null],[12,"isbin_isright_isbe_iscram_dummy","","",15,null],[12,"lineno","","",15,null],[12,"line","","",15,null],[12,"_fn","","",15,null],[12,"fn_aux","","",15,null],[12,"fp","","",15,null],[12,"format","","",15,null],[3,"Union_Unnamed3","","",null,null],[12,"_bindgen_data_","","",16,null],[3,"Struct_Unnamed4","","",null,null],[12,"u","","",17,null],[12,"v","","",17,null],[3,"Struct_Unnamed5","","",null,null],[12,"readres_finished_dummy","","",18,null],[12,"tid","","",18,null],[12,"beg","","",18,null],[12,"end","","",18,null],[12,"n_off","","",18,null],[12,"i","","",18,null],[12,"curr_tid","","",18,null],[12,"curr_beg","","",18,null],[12,"curr_end","","",18,null],[12,"curr_off","","",18,null],[12,"off","","",18,null],[12,"readrec","","",18,null],[12,"bins","","",18,null],[3,"Struct_Unnamed6","","",null,null],[12,"n","","",19,null],[12,"m","","",19,null],[12,"a","","",19,null],[3,"Struct_Unnamed7","","",null,null],[12,"__val","","",20,null],[3,"Union_wait","","",null,null],[12,"_bindgen_data_","","",21,null],[3,"Struct_Unnamed8","","",null,null],[12,"_bindgen_bitfield_1_","","",22,null],[3,"Struct_Unnamed9","","",null,null],[12,"_bindgen_bitfield_1_","","",23,null],[3,"Union_Unnamed10","","",null,null],[12,"_bindgen_data_","","",24,null],[3,"Struct_Unnamed11","","",null,null],[12,"quot","","",25,null],[12,"rem","","",25,null],[3,"Struct_Unnamed12","","",null,null],[12,"quot","","",26,null],[12,"rem","","",26,null],[3,"Struct_Unnamed13","","",null,null],[12,"quot","","",27,null],[12,"rem","","",27,null],[3,"Struct_Unnamed14","","",null,null],[12,"__val","","",28,null],[3,"Struct_timespec","","",null,null],[12,"tv_sec","","",29,null],[12,"tv_nsec","","",29,null],[3,"Struct_timeval","","",null,null],[12,"tv_sec","","",30,null],[12,"tv_usec","","",30,null],[3,"Struct_Unnamed15","","",null,null],[12,"__fds_bits","","",31,null],[3,"Union_pthread_attr_t","","",null,null],[12,"_bindgen_data_","","",32,null],[3,"Struct___pthread_internal_list","","",null,null],[12,"__prev","","",33,null],[12,"__next","","",33,null],[3,"Union_Unnamed16","","",null,null],[12,"_bindgen_data_","","",34,null],[3,"Struct___pthread_mutex_s","","",null,null],[12,"__lock","","",35,null],[12,"__count","","",35,null],[12,"__owner","","",35,null],[12,"__nusers","","",35,null],[12,"__kind","","",35,null],[12,"__spins","","",35,null],[12,"__elision","","",35,null],[12,"__list","","",35,null],[3,"Union_Unnamed17","","",null,null],[12,"_bindgen_data_","","",36,null],[3,"Union_Unnamed18","","",null,null],[12,"_bindgen_data_","","",37,null],[3,"Struct_Unnamed19","","",null,null],[12,"__lock","","",38,null],[12,"__futex","","",38,null],[12,"__total_seq","","",38,null],[12,"__wakeup_seq","","",38,null],[12,"__woken_seq","","",38,null],[12,"__mutex","","",38,null],[12,"__nwaiters","","",38,null],[12,"__broadcast_seq","","",38,null],[3,"Union_Unnamed20","","",null,null],[12,"_bindgen_data_","","",39,null],[3,"Union_Unnamed21","","",null,null],[12,"_bindgen_data_","","",40,null],[3,"Struct_Unnamed22","","",null,null],[12,"__lock","","",41,null],[12,"__nr_readers","","",41,null],[12,"__readers_wakeup","","",41,null],[12,"__writer_wakeup","","",41,null],[12,"__nr_readers_queued","","",41,null],[12,"__nr_writers_queued","","",41,null],[12,"__writer","","",41,null],[12,"__shared","","",41,null],[12,"__pad1","","",41,null],[12,"__pad2","","",41,null],[12,"__flags","","",41,null],[3,"Union_Unnamed23","","",null,null],[12,"_bindgen_data_","","",42,null],[3,"Union_Unnamed24","","",null,null],[12,"_bindgen_data_","","",43,null],[3,"Union_Unnamed25","","",null,null],[12,"_bindgen_data_","","",44,null],[3,"Struct_random_data","","",null,null],[12,"fptr","","",45,null],[12,"rptr","","",45,null],[12,"state","","",45,null],[12,"rand_type","","",45,null],[12,"rand_deg","","",45,null],[12,"rand_sep","","",45,null],[12,"end_ptr","","",45,null],[3,"Struct_drand48_data","","",null,null],[12,"__x","","",46,null],[12,"__old_x","","",46,null],[12,"__c","","",46,null],[12,"__init","","",46,null],[12,"__a","","",46,null],[3,"Struct___locale_struct","","",null,null],[12,"__locales","","",47,null],[12,"__ctype_b","","",47,null],[12,"__ctype_tolower","","",47,null],[12,"__ctype_toupper","","",47,null],[12,"__names","","",47,null],[3,"Struct_Unnamed26","","",null,null],[12,"__count","","",48,null],[12,"__value","","",48,null],[3,"Union_Unnamed27","","",null,null],[12,"_bindgen_data_","","",49,null],[3,"Struct_Unnamed28","","",null,null],[12,"__pos","","",50,null],[12,"__state","","",50,null],[3,"Struct_Unnamed29","","",null,null],[12,"__pos","","",51,null],[12,"__state","","",51,null],[3,"Struct__IO_marker","","",null,null],[12,"_next","","",52,null],[12,"_sbuf","","",52,null],[12,"_pos","","",52,null],[3,"Struct__IO_FILE","","",null,null],[12,"_flags","","",53,null],[12,"_IO_read_ptr","","",53,null],[12,"_IO_read_end","","",53,null],[12,"_IO_read_base","","",53,null],[12,"_IO_write_base","","",53,null],[12,"_IO_write_ptr","","",53,null],[12,"_IO_write_end","","",53,null],[12,"_IO_buf_base","","",53,null],[12,"_IO_buf_end","","",53,null],[12,"_IO_save_base","","",53,null],[12,"_IO_backup_base","","",53,null],[12,"_IO_save_end","","",53,null],[12,"_markers","","",53,null],[12,"_chain","","",53,null],[12,"_fileno","","",53,null],[12,"_flags2","","",53,null],[12,"_old_offset","","",53,null],[12,"_cur_column","","",53,null],[12,"_vtable_offset","","",53,null],[12,"_shortbuf","","",53,null],[12,"_lock","","",53,null],[12,"_offset","","",53,null],[12,"__pad1","","",53,null],[12,"__pad2","","",53,null],[12,"__pad3","","",53,null],[12,"__pad4","","",53,null],[12,"__pad5","","",53,null],[12,"_mode","","",53,null],[12,"_unused2","","",53,null],[3,"Struct_Unnamed30","","",null,null],[12,"tab","","",54,null],[12,"sep","","",54,null],[12,"finished","","",54,null],[12,"p","","",54,null],[3,"Struct_Unnamed31","","",null,null],[12,"_type","","",55,null],[12,"key","","",55,null],[12,"value","","",55,null],[12,"nkeys","","",55,null],[12,"keys","","",55,null],[12,"vals","","",55,null],[3,"Struct_Unnamed32","","",null,null],[12,"info","","",56,null],[12,"hrec","","",56,null],[12,"id","","",56,null],[3,"Struct_Unnamed33","","",null,null],[12,"key","","",57,null],[12,"val","","",57,null],[3,"Struct_Unnamed34","","",null,null],[12,"n","","",58,null],[12,"id","","",58,null],[12,"dict","","",58,null],[12,"samples","","",58,null],[12,"hrec","","",58,null],[12,"nhrec","","",58,null],[12,"dirty","","",58,null],[12,"ntransl","","",58,null],[12,"transl","","",58,null],[12,"nsamples_ori","","",58,null],[12,"keep_samples","","",58,null],[12,"mem","","",58,null],[3,"Struct_Unnamed35","","",null,null],[12,"_type","","",59,null],[12,"n","","",59,null],[3,"Struct_Unnamed36","","",null,null],[12,"id","","",60,null],[12,"n","","",60,null],[12,"size","","",60,null],[12,"_type","","",60,null],[12,"p","","",60,null],[12,"p_len","","",60,null],[12,"p_off_p_free","","",60,null],[3,"Struct_Unnamed37","","",null,null],[12,"key","","",61,null],[12,"_type","","",61,null],[12,"len","","",61,null],[12,"v1","","",61,null],[12,"vptr","","",61,null],[12,"vptr_len","","",61,null],[12,"vptr_off_vptr_free","","",61,null],[3,"Union_Unnamed38","","",null,null],[12,"_bindgen_data_","","",62,null],[3,"Struct_Unnamed39","","",null,null],[12,"m_fmt","","",63,null],[12,"m_info","","",63,null],[12,"m_id","","",63,null],[12,"m_als","","",63,null],[12,"m_allele","","",63,null],[12,"m_flt","","",63,null],[12,"n_flt","","",63,null],[12,"flt","","",63,null],[12,"id","","",63,null],[12,"als","","",63,null],[12,"allele","","",63,null],[12,"info","","",63,null],[12,"fmt","","",63,null],[12,"var","","",63,null],[12,"n_var","","",63,null],[12,"var_type","","",63,null],[12,"shared_dirty","","",63,null],[12,"indiv_dirty","","",63,null],[3,"Struct_Unnamed40","","",null,null],[12,"rid","","",64,null],[12,"pos","","",64,null],[12,"rlen","","",64,null],[12,"qual","","",64,null],[12,"n_info","","",64,null],[12,"n_allele","","",64,null],[12,"n_fmt_n_sample","","",64,null],[12,"shared","","",64,null],[12,"indiv","","",64,null],[12,"d","","",64,null],[12,"max_unpack","","",64,null],[12,"unpacked","","",64,null],[12,"unpack_size","","",64,null],[12,"errcode","","",64,null],[3,"Struct___va_list_tag","","",null,null],[12,"gp_offset","","",65,null],[12,"fp_offset","","",65,null],[12,"overflow_arg_area","","",65,null],[12,"reg_save_area","","",65,null],[4,"Struct_BGZF","","",null,null],[4,"Struct_cram_fd","","",null,null],[4,"Struct_hFILE","","",null,null],[4,"Struct___hts_idx_t","","",null,null],[4,"Struct___locale_data","","",null,null],[4,"Struct__IO_jump_t","","",null,null],[4,"Struct__IO_FILE_plus","","",null,null],[5,"bcf_read1_core","","",null,null],[7,"hts_verbose","","",null,null],[7,"seq_nt16_table","","",null,null],[7,"seq_nt16_str","","",null,null],[7,"seq_nt16_int","","",null,null],[7,"_IO_2_1_stdin_","","",null,null],[7,"_IO_2_1_stdout_","","",null,null],[7,"_IO_2_1_stderr_","","",null,null],[7,"stdin","","",null,null],[7,"stdout","","",null,null],[7,"stderr","","",null,null],[7,"sys_nerr","","",null,null],[7,"sys_errlist","","",null,null],[7,"bcf_type_shift","","",null,null],[7,"bcf_float_vector_end","","",null,null],[7,"bcf_float_missing","","",null,null],[5,"__assert_fail","","",null,null],[5,"__assert_perror_fail","","",null,null],[5,"__assert","","",null,null],[5,"hts_version","","",null,null],[5,"hts_detect_format","","",null,null],[5,"hts_format_description","","",null,null],[5,"hts_open","","",null,null],[5,"hts_hopen","","",null,null],[5,"hts_close","","",null,null],[5,"hts_get_format","","",null,null],[5,"hts_set_opt","","",null,null],[5,"hts_getline","","",null,null],[5,"hts_readlines","","",null,null],[5,"hts_readlist","","",null,null],[5,"hts_set_threads","","",null,null],[5,"hts_set_fai_filename","","",null,null],[5,"hts_idx_init","","",null,null],[5,"hts_idx_destroy","","",null,null],[5,"hts_idx_push","","",null,null],[5,"hts_idx_finish","","",null,null],[5,"hts_idx_save","","",null,null],[5,"hts_idx_load","","",null,null],[5,"hts_idx_get_meta","","",null,null],[5,"hts_idx_set_meta","","",null,null],[5,"hts_idx_get_stat","","",null,null],[5,"hts_idx_get_n_no_coor","","",null,null],[5,"hts_parse_reg","","",null,null],[5,"hts_itr_query","","",null,null],[5,"hts_itr_destroy","","",null,null],[5,"hts_itr_querys","","",null,null],[5,"hts_itr_next","","",null,null],[5,"hts_idx_seqnames","","",null,null],[5,"hts_file_type","","",null,null],[5,"__ctype_get_mb_cur_max","","",null,null],[5,"atof","","",null,null],[5,"atoi","","",null,null],[5,"atol","","",null,null],[5,"atoll","","",null,null],[5,"strtod","","",null,null],[5,"strtof","","",null,null],[5,"strtold","","",null,null],[5,"strtol","","",null,null],[5,"strtoul","","",null,null],[5,"strtoq","","",null,null],[5,"strtouq","","",null,null],[5,"strtoll","","",null,null],[5,"strtoull","","",null,null],[5,"l64a","","",null,null],[5,"a64l","","",null,null],[5,"select","","",null,null],[5,"pselect","","",null,null],[5,"gnu_dev_major","","",null,null],[5,"gnu_dev_minor","","",null,null],[5,"gnu_dev_makedev","","",null,null],[5,"random","","",null,null],[5,"srandom","","",null,null],[5,"initstate","","",null,null],[5,"setstate","","",null,null],[5,"random_r","","",null,null],[5,"srandom_r","","",null,null],[5,"initstate_r","","",null,null],[5,"setstate_r","","",null,null],[5,"rand","","",null,null],[5,"srand","","",null,null],[5,"rand_r","","",null,null],[5,"drand48","","",null,null],[5,"erand48","","",null,null],[5,"lrand48","","",null,null],[5,"nrand48","","",null,null],[5,"mrand48","","",null,null],[5,"jrand48","","",null,null],[5,"srand48","","",null,null],[5,"seed48","","",null,null],[5,"lcong48","","",null,null],[5,"drand48_r","","",null,null],[5,"erand48_r","","",null,null],[5,"lrand48_r","","",null,null],[5,"nrand48_r","","",null,null],[5,"mrand48_r","","",null,null],[5,"jrand48_r","","",null,null],[5,"srand48_r","","",null,null],[5,"seed48_r","","",null,null],[5,"lcong48_r","","",null,null],[5,"malloc","","",null,null],[5,"calloc","","",null,null],[5,"realloc","","",null,null],[5,"free","","",null,null],[5,"cfree","","",null,null],[5,"alloca","","",null,null],[5,"valloc","","",null,null],[5,"posix_memalign","","",null,null],[5,"abort","","",null,null],[5,"atexit","","",null,null],[5,"on_exit","","",null,null],[5,"exit","","",null,null],[5,"_Exit","","",null,null],[5,"getenv","","",null,null],[5,"putenv","","",null,null],[5,"setenv","","",null,null],[5,"unsetenv","","",null,null],[5,"clearenv","","",null,null],[5,"mktemp","","",null,null],[5,"mkstemp","","",null,null],[5,"mkstemps","","",null,null],[5,"mkdtemp","","",null,null],[5,"system","","",null,null],[5,"realpath","","",null,null],[5,"bsearch","","",null,null],[5,"qsort","","",null,null],[5,"abs","","",null,null],[5,"labs","","",null,null],[5,"llabs","","",null,null],[5,"div","","",null,null],[5,"ldiv","","",null,null],[5,"lldiv","","",null,null],[5,"ecvt","","",null,null],[5,"fcvt","","",null,null],[5,"gcvt","","",null,null],[5,"qecvt","","",null,null],[5,"qfcvt","","",null,null],[5,"qgcvt","","",null,null],[5,"ecvt_r","","",null,null],[5,"fcvt_r","","",null,null],[5,"qecvt_r","","",null,null],[5,"qfcvt_r","","",null,null],[5,"mblen","","",null,null],[5,"mbtowc","","",null,null],[5,"wctomb","","",null,null],[5,"mbstowcs","","",null,null],[5,"wcstombs","","",null,null],[5,"rpmatch","","",null,null],[5,"getsubopt","","",null,null],[5,"getloadavg","","",null,null],[5,"memcpy","","",null,null],[5,"memmove","","",null,null],[5,"memccpy","","",null,null],[5,"memset","","",null,null],[5,"memcmp","","",null,null],[5,"memchr","","",null,null],[5,"strcpy","","",null,null],[5,"strncpy","","",null,null],[5,"strcat","","",null,null],[5,"strncat","","",null,null],[5,"strcmp","","",null,null],[5,"strncmp","","",null,null],[5,"strcoll","","",null,null],[5,"strxfrm","","",null,null],[5,"strcoll_l","","",null,null],[5,"strxfrm_l","","",null,null],[5,"strdup","","",null,null],[5,"strndup","","",null,null],[5,"strchr","","",null,null],[5,"strrchr","","",null,null],[5,"strcspn","","",null,null],[5,"strspn","","",null,null],[5,"strpbrk","","",null,null],[5,"strstr","","",null,null],[5,"strtok","","",null,null],[5,"__strtok_r","","",null,null],[5,"strtok_r","","",null,null],[5,"strlen","","",null,null],[5,"strnlen","","",null,null],[5,"strerror","","",null,null],[5,"strerror_r","","",null,null],[5,"strerror_l","","",null,null],[5,"__bzero","","",null,null],[5,"bcopy","","",null,null],[5,"bzero","","",null,null],[5,"bcmp","","",null,null],[5,"index","","",null,null],[5,"rindex","","",null,null],[5,"ffs","","",null,null],[5,"strcasecmp","","",null,null],[5,"strncasecmp","","",null,null],[5,"strsep","","",null,null],[5,"strsignal","","",null,null],[5,"__stpcpy","","",null,null],[5,"stpcpy","","",null,null],[5,"__stpncpy","","",null,null],[5,"stpncpy","","",null,null],[5,"__underflow","","",null,null],[5,"__uflow","","",null,null],[5,"__overflow","","",null,null],[5,"_IO_getc","","",null,null],[5,"_IO_putc","","",null,null],[5,"_IO_feof","","",null,null],[5,"_IO_ferror","","",null,null],[5,"_IO_peekc_locked","","",null,null],[5,"_IO_flockfile","","",null,null],[5,"_IO_funlockfile","","",null,null],[5,"_IO_ftrylockfile","","",null,null],[5,"_IO_vfscanf","","",null,null],[5,"_IO_vfprintf","","",null,null],[5,"_IO_padn","","",null,null],[5,"_IO_sgetn","","",null,null],[5,"_IO_seekoff","","",null,null],[5,"_IO_seekpos","","",null,null],[5,"_IO_free_backup_area","","",null,null],[5,"remove","","",null,null],[5,"rename","","",null,null],[5,"renameat","","",null,null],[5,"tmpfile","","",null,null],[5,"tmpnam","","",null,null],[5,"tmpnam_r","","",null,null],[5,"tempnam","","",null,null],[5,"fclose","","",null,null],[5,"fflush","","",null,null],[5,"fflush_unlocked","","",null,null],[5,"fopen","","",null,null],[5,"freopen","","",null,null],[5,"fdopen","","",null,null],[5,"fmemopen","","",null,null],[5,"open_memstream","","",null,null],[5,"setbuf","","",null,null],[5,"setvbuf","","",null,null],[5,"setbuffer","","",null,null],[5,"setlinebuf","","",null,null],[5,"fprintf","","",null,null],[5,"printf","","",null,null],[5,"sprintf","","",null,null],[5,"vfprintf","","",null,null],[5,"vprintf","","",null,null],[5,"vsprintf","","",null,null],[5,"snprintf","","",null,null],[5,"vsnprintf","","",null,null],[5,"vdprintf","","",null,null],[5,"dprintf","","",null,null],[5,"fscanf","","",null,null],[5,"scanf","","",null,null],[5,"sscanf","","",null,null],[5,"vfscanf","","",null,null],[5,"vscanf","","",null,null],[5,"vsscanf","","",null,null],[5,"fgetc","","",null,null],[5,"getc","","",null,null],[5,"getchar","","",null,null],[5,"getc_unlocked","","",null,null],[5,"getchar_unlocked","","",null,null],[5,"fgetc_unlocked","","",null,null],[5,"fputc","","",null,null],[5,"putc","","",null,null],[5,"putchar","","",null,null],[5,"fputc_unlocked","","",null,null],[5,"putc_unlocked","","",null,null],[5,"putchar_unlocked","","",null,null],[5,"getw","","",null,null],[5,"putw","","",null,null],[5,"fgets","","",null,null],[5,"gets","","",null,null],[5,"__getdelim","","",null,null],[5,"getdelim","","",null,null],[5,"getline","","",null,null],[5,"fputs","","",null,null],[5,"puts","","",null,null],[5,"ungetc","","",null,null],[5,"fread","","",null,null],[5,"fwrite","","",null,null],[5,"fread_unlocked","","",null,null],[5,"fwrite_unlocked","","",null,null],[5,"fseek","","",null,null],[5,"ftell","","",null,null],[5,"rewind","","",null,null],[5,"fseeko","","",null,null],[5,"ftello","","",null,null],[5,"fgetpos","","",null,null],[5,"fsetpos","","",null,null],[5,"clearerr","","",null,null],[5,"feof","","",null,null],[5,"ferror","","",null,null],[5,"clearerr_unlocked","","",null,null],[5,"feof_unlocked","","",null,null],[5,"ferror_unlocked","","",null,null],[5,"perror","","",null,null],[5,"fileno","","",null,null],[5,"fileno_unlocked","","",null,null],[5,"popen","","",null,null],[5,"pclose","","",null,null],[5,"ctermid","","",null,null],[5,"flockfile","","",null,null],[5,"ftrylockfile","","",null,null],[5,"funlockfile","","",null,null],[5,"kvsprintf","","",null,null],[5,"ksprintf","","",null,null],[5,"ksplit_core","","",null,null],[5,"kstrstr","","",null,null],[5,"kstrnstr","","",null,null],[5,"kmemmem","","",null,null],[5,"kstrtok","","",null,null],[5,"bcf_hdr_init","","",null,null],[5,"bcf_hdr_destroy","","",null,null],[5,"bcf_init","","",null,null],[5,"bcf_destroy","","",null,null],[5,"bcf_empty","","",null,null],[5,"bcf_clear","","",null,null],[5,"bcf_hdr_read","","",null,null],[5,"bcf_hdr_set_samples","","",null,null],[5,"bcf_subset_format","","",null,null],[5,"bcf_hdr_write","","",null,null],[5,"vcf_parse","","",null,null],[5,"vcf_format","","",null,null],[5,"bcf_read","","",null,null],[5,"bcf_unpack","","",null,null],[5,"bcf_dup","","",null,null],[5,"bcf_copy","","",null,null],[5,"bcf_write","","",null,null],[5,"vcf_hdr_read","","",null,null],[5,"vcf_hdr_write","","",null,null],[5,"vcf_read","","",null,null],[5,"vcf_write","","",null,null],[5,"bcf_readrec","","",null,null],[5,"bcf_hdr_dup","","",null,null],[5,"bcf_hdr_combine","","",null,null],[5,"bcf_hdr_add_sample","","",null,null],[5,"bcf_hdr_set","","",null,null],[5,"bcf_hdr_fmt_text","","",null,null],[5,"bcf_hdr_append","","",null,null],[5,"bcf_hdr_printf","","",null,null],[5,"bcf_hdr_get_version","","",null,null],[5,"bcf_hdr_set_version","","",null,null],[5,"bcf_hdr_remove","","",null,null],[5,"bcf_hdr_subset","","",null,null],[5,"bcf_hdr_seqnames","","",null,null],[5,"bcf_hdr_parse","","",null,null],[5,"bcf_hdr_sync","","",null,null],[5,"bcf_hdr_parse_line","","",null,null],[5,"bcf_hrec_format","","",null,null],[5,"bcf_hdr_add_hrec","","",null,null],[5,"bcf_hdr_get_hrec","","",null,null],[5,"bcf_hrec_dup","","",null,null],[5,"bcf_hrec_add_key","","",null,null],[5,"bcf_hrec_set_val","","",null,null],[5,"bcf_hrec_find_key","","",null,null],[5,"hrec_add_idx","","",null,null],[5,"bcf_hrec_destroy","","",null,null],[5,"bcf_subset","","",null,null],[5,"bcf_translate","","",null,null],[5,"bcf_get_variant_types","","",null,null],[5,"bcf_get_variant_type","","",null,null],[5,"bcf_is_snp","","",null,null],[5,"bcf_update_filter","","",null,null],[5,"bcf_add_filter","","",null,null],[5,"bcf_remove_filter","","",null,null],[5,"bcf_has_filter","","",null,null],[5,"bcf_update_alleles","","",null,null],[5,"bcf_update_alleles_str","","",null,null],[5,"bcf_update_id","","",null,null],[5,"bcf_update_info","","",null,null],[5,"bcf_update_format_string","","",null,null],[5,"bcf_update_format","","",null,null],[5,"bcf_get_fmt","","",null,null],[5,"bcf_get_info","","",null,null],[5,"bcf_get_fmt_id","","",null,null],[5,"bcf_get_info_id","","",null,null],[5,"bcf_get_info_values","","",null,null],[5,"bcf_get_format_string","","",null,null],[5,"bcf_get_format_values","","",null,null],[5,"bcf_hdr_id2int","","",null,null],[5,"bcf_fmt_array","","",null,null],[5,"bcf_fmt_sized_array","","",null,null],[5,"bcf_enc_vchar","","",null,null],[5,"bcf_enc_vint","","",null,null],[5,"bcf_enc_vfloat","","",null,null],[5,"bcf_index_build","","",null,null],[6,"__int128_t","","",null,null],[6,"__uint128_t","","",null,null],[6,"__builtin_va_list","","",null,null],[6,"int8_t","","",null,null],[6,"int16_t","","",null,null],[6,"int32_t","","",null,null],[6,"int64_t","","",null,null],[6,"uint8_t","","",null,null],[6,"uint16_t","","",null,null],[6,"uint32_t","","",null,null],[6,"uint64_t","","",null,null],[6,"int_least8_t","","",null,null],[6,"int_least16_t","","",null,null],[6,"int_least32_t","","",null,null],[6,"int_least64_t","","",null,null],[6,"uint_least8_t","","",null,null],[6,"uint_least16_t","","",null,null],[6,"uint_least32_t","","",null,null],[6,"uint_least64_t","","",null,null],[6,"int_fast8_t","","",null,null],[6,"int_fast16_t","","",null,null],[6,"int_fast32_t","","",null,null],[6,"int_fast64_t","","",null,null],[6,"uint_fast8_t","","",null,null],[6,"uint_fast16_t","","",null,null],[6,"uint_fast32_t","","",null,null],[6,"uint_fast64_t","","",null,null],[6,"intptr_t","","",null,null],[6,"uintptr_t","","",null,null],[6,"intmax_t","","",null,null],[6,"uintmax_t","","",null,null],[6,"ptrdiff_t","","",null,null],[6,"size_t","","",null,null],[6,"wchar_t","","",null,null],[6,"BGZF","","",null,null],[6,"kstring_t","","",null,null],[6,"Enum_htsFormatCategory","","",null,null],[6,"Enum_htsExactFormat","","",null,null],[6,"Enum_htsCompression","","",null,null],[6,"htsFormat","","",null,null],[6,"htsFile","","",null,null],[6,"Enum_sam_fields","","",null,null],[6,"Enum_cram_option","","",null,null],[6,"hts_idx_t","","",null,null],[6,"hts_pair64_t","","",null,null],[6,"hts_readrec_func","","",null,null],[6,"hts_itr_t","","",null,null],[6,"hts_name2id_f","","",null,null],[6,"hts_id2name_f","","",null,null],[6,"hts_itr_query_func","","",null,null],[6,"__u_char","","",null,null],[6,"__u_short","","",null,null],[6,"__u_int","","",null,null],[6,"__u_long","","",null,null],[6,"__int8_t","","",null,null],[6,"__uint8_t","","",null,null],[6,"__int16_t","","",null,null],[6,"__uint16_t","","",null,null],[6,"__int32_t","","",null,null],[6,"__uint32_t","","",null,null],[6,"__int64_t","","",null,null],[6,"__uint64_t","","",null,null],[6,"__quad_t","","",null,null],[6,"__u_quad_t","","",null,null],[6,"__dev_t","","",null,null],[6,"__uid_t","","",null,null],[6,"__gid_t","","",null,null],[6,"__ino_t","","",null,null],[6,"__ino64_t","","",null,null],[6,"__mode_t","","",null,null],[6,"__nlink_t","","",null,null],[6,"__off_t","","",null,null],[6,"__off64_t","","",null,null],[6,"__pid_t","","",null,null],[6,"__fsid_t","","",null,null],[6,"__clock_t","","",null,null],[6,"__rlim_t","","",null,null],[6,"__rlim64_t","","",null,null],[6,"__id_t","","",null,null],[6,"__time_t","","",null,null],[6,"__useconds_t","","",null,null],[6,"__suseconds_t","","",null,null],[6,"__daddr_t","","",null,null],[6,"__key_t","","",null,null],[6,"__clockid_t","","",null,null],[6,"__timer_t","","",null,null],[6,"__blksize_t","","",null,null],[6,"__blkcnt_t","","",null,null],[6,"__blkcnt64_t","","",null,null],[6,"__fsblkcnt_t","","",null,null],[6,"__fsblkcnt64_t","","",null,null],[6,"__fsfilcnt_t","","",null,null],[6,"__fsfilcnt64_t","","",null,null],[6,"__fsword_t","","",null,null],[6,"__ssize_t","","",null,null],[6,"__syscall_slong_t","","",null,null],[6,"__syscall_ulong_t","","",null,null],[6,"__loff_t","","",null,null],[6,"__qaddr_t","","",null,null],[6,"__caddr_t","","",null,null],[6,"__intptr_t","","",null,null],[6,"__socklen_t","","",null,null],[6,"__WAIT_STATUS","","",null,null],[6,"div_t","","",null,null],[6,"ldiv_t","","",null,null],[6,"lldiv_t","","",null,null],[6,"u_char","","",null,null],[6,"u_short","","",null,null],[6,"u_int","","",null,null],[6,"u_long","","",null,null],[6,"quad_t","","",null,null],[6,"u_quad_t","","",null,null],[6,"fsid_t","","",null,null],[6,"loff_t","","",null,null],[6,"ino_t","","",null,null],[6,"dev_t","","",null,null],[6,"gid_t","","",null,null],[6,"mode_t","","",null,null],[6,"nlink_t","","",null,null],[6,"uid_t","","",null,null],[6,"off_t","","",null,null],[6,"pid_t","","",null,null],[6,"id_t","","",null,null],[6,"ssize_t","","",null,null],[6,"daddr_t","","",null,null],[6,"caddr_t","","",null,null],[6,"key_t","","",null,null],[6,"clock_t","","",null,null],[6,"time_t","","",null,null],[6,"clockid_t","","",null,null],[6,"timer_t","","",null,null],[6,"ulong","","",null,null],[6,"ushort","","",null,null],[6,"_uint","","",null,null],[6,"u_int8_t","","",null,null],[6,"u_int16_t","","",null,null],[6,"u_int32_t","","",null,null],[6,"u_int64_t","","",null,null],[6,"register_t","","",null,null],[6,"__sig_atomic_t","","",null,null],[6,"__sigset_t","","",null,null],[6,"sigset_t","","",null,null],[6,"suseconds_t","","",null,null],[6,"__fd_mask","","",null,null],[6,"fd_set","","",null,null],[6,"fd_mask","","",null,null],[6,"blksize_t","","",null,null],[6,"blkcnt_t","","",null,null],[6,"fsblkcnt_t","","",null,null],[6,"fsfilcnt_t","","",null,null],[6,"pthread_t","","",null,null],[6,"pthread_attr_t","","",null,null],[6,"__pthread_list_t","","",null,null],[6,"pthread_mutex_t","","",null,null],[6,"pthread_mutexattr_t","","",null,null],[6,"pthread_cond_t","","",null,null],[6,"pthread_condattr_t","","",null,null],[6,"pthread_key_t","","",null,null],[6,"pthread_once_t","","",null,null],[6,"pthread_rwlock_t","","",null,null],[6,"pthread_rwlockattr_t","","",null,null],[6,"pthread_spinlock_t","","",null,null],[6,"pthread_barrier_t","","",null,null],[6,"pthread_barrierattr_t","","",null,null],[6,"__compar_fn_t","","",null,null],[6,"__locale_t","","",null,null],[6,"locale_t","","",null,null],[6,"__gnuc_va_list","","",null,null],[6,"va_list","","",null,null],[6,"FILE","","",null,null],[6,"__FILE","","",null,null],[6,"__mbstate_t","","",null,null],[6,"_G_fpos_t","","",null,null],[6,"_G_fpos64_t","","",null,null],[6,"_IO_lock_t","","",null,null],[6,"Enum___codecvt_result","","",null,null],[6,"_IO_FILE","","",null,null],[6,"__io_read_fn","","",null,null],[6,"__io_write_fn","","",null,null],[6,"__io_seek_fn","","",null,null],[6,"__io_close_fn","","",null,null],[6,"fpos_t","","",null,null],[6,"ks_tokaux_t","","",null,null],[6,"bcf_hrec_t","","",null,null],[6,"bcf_idinfo_t","","",null,null],[6,"bcf_idpair_t","","",null,null],[6,"bcf_hdr_t","","",null,null],[6,"variant_t","","",null,null],[6,"bcf_fmt_t","","",null,null],[6,"bcf_info_t","","",null,null],[6,"bcf_dec_t","","",null,null],[6,"bcf1_t","","",null,null],[6,"vcfFile","","",null,null],[6,"__va_list_tag","","",null,null],[17,"BCF_HL_FLT","","",null,null],[17,"BCF_HL_INFO","","",null,null],[17,"BCF_HL_FMT","","",null,null],[17,"BCF_HL_CTG","","",null,null],[17,"BCF_HL_STR","","",null,null],[17,"BCF_HL_GEN","","",null,null],[17,"BCF_HT_FLAG","","",null,null],[17,"BCF_HT_INT","","",null,null],[17,"BCF_HT_REAL","","",null,null],[17,"BCF_HT_STR","","",null,null],[17,"BCF_UN_STR","","",null,null],[17,"BCF_UN_FLT","","",null,null],[17,"BCF_DT_ID","","",null,null],[17,"BCF_DT_CTG","","",null,null],[17,"BCF_DT_SAMPLE","","",null,null],[17,"unknown_category","","",null,null],[17,"sequence_data","","",null,null],[17,"variant_data","","",null,null],[17,"index_file","","",null,null],[17,"region_list","","",null,null],[17,"category_maximum","","",null,null],[17,"unknown_format","","",null,null],[17,"binary_format","","",null,null],[17,"text_format","","",null,null],[17,"sam","","",null,null],[17,"bam","","",null,null],[17,"bai","","",null,null],[17,"cram","","",null,null],[17,"crai","","",null,null],[17,"vcf","","",null,null],[17,"bcf","","",null,null],[17,"csi","","",null,null],[17,"gzi","","",null,null],[17,"tbi","","",null,null],[17,"bed","","",null,null],[17,"format_maximum","","",null,null],[17,"no_compression","","",null,null],[17,"gzip","","",null,null],[17,"bgzf","","",null,null],[17,"custom","","",null,null],[17,"compression_maximum","","",null,null],[17,"SAM_QNAME","","",null,null],[17,"SAM_FLAG","","",null,null],[17,"SAM_RNAME","","",null,null],[17,"SAM_POS","","",null,null],[17,"SAM_MAPQ","","",null,null],[17,"SAM_CIGAR","","",null,null],[17,"SAM_RNEXT","","",null,null],[17,"SAM_PNEXT","","",null,null],[17,"SAM_TLEN","","",null,null],[17,"SAM_SEQ","","",null,null],[17,"SAM_QUAL","","",null,null],[17,"SAM_AUX","","",null,null],[17,"SAM_RGAUX","","",null,null],[17,"CRAM_OPT_DECODE_MD","","",null,null],[17,"CRAM_OPT_PREFIX","","",null,null],[17,"CRAM_OPT_VERBOSITY","","",null,null],[17,"CRAM_OPT_SEQS_PER_SLICE","","",null,null],[17,"CRAM_OPT_SLICES_PER_CONTAINER","","",null,null],[17,"CRAM_OPT_RANGE","","",null,null],[17,"CRAM_OPT_VERSION","","",null,null],[17,"CRAM_OPT_EMBED_REF","","",null,null],[17,"CRAM_OPT_IGNORE_MD5","","",null,null],[17,"CRAM_OPT_REFERENCE","","",null,null],[17,"CRAM_OPT_MULTI_SEQ_PER_SLICE","","",null,null],[17,"CRAM_OPT_NO_REF","","",null,null],[17,"CRAM_OPT_USE_BZIP2","","",null,null],[17,"CRAM_OPT_SHARED_REF","","",null,null],[17,"CRAM_OPT_NTHREADS","","",null,null],[17,"CRAM_OPT_THREAD_POOL","","",null,null],[17,"CRAM_OPT_USE_LZMA","","",null,null],[17,"CRAM_OPT_USE_RANS","","",null,null],[17,"CRAM_OPT_REQUIRED_FIELDS","","",null,null],[17,"__codecvt_ok","","",null,null],[17,"__codecvt_partial","","",null,null],[17,"__codecvt_error","","",null,null],[17,"__codecvt_noconv","","",null,null],[11,"clone","","",12,null],[11,"default","","",12,{"inputs":[],"output":{"name":"struct___kstring_t"}}],[11,"clone","","",13,null],[11,"default","","",13,{"inputs":[],"output":{"name":"struct_htsformat"}}],[11,"clone","","",14,null],[11,"default","","",14,{"inputs":[],"output":{"name":"struct_unnamed1"}}],[11,"clone","","",15,null],[11,"default","","",15,{"inputs":[],"output":{"name":"struct_unnamed2"}}],[11,"clone","","",16,null],[11,"bgzf","","",16,null],[11,"cram","","",16,null],[11,"hfile","","",16,null],[11,"voidp","","",16,null],[11,"default","","",16,{"inputs":[],"output":{"name":"union_unnamed3"}}],[11,"clone","","",17,null],[11,"default","","",17,{"inputs":[],"output":{"name":"struct_unnamed4"}}],[11,"clone","","",18,null],[11,"default","","",18,{"inputs":[],"output":{"name":"struct_unnamed5"}}],[11,"clone","","",19,null],[11,"default","","",19,{"inputs":[],"output":{"name":"struct_unnamed6"}}],[11,"clone","","",20,null],[11,"default","","",20,{"inputs":[],"output":{"name":"struct_unnamed7"}}],[11,"clone","","",21,null],[11,"w_status","","",21,null],[11,"__wait_terminated","","",21,null],[11,"__wait_stopped","","",21,null],[11,"default","","",21,{"inputs":[],"output":{"name":"union_wait"}}],[11,"clone","","",22,null],[11,"default","","",22,{"inputs":[],"output":{"name":"struct_unnamed8"}}],[11,"clone","","",23,null],[11,"default","","",23,{"inputs":[],"output":{"name":"struct_unnamed9"}}],[11,"clone","","",24,null],[11,"__uptr","","",24,null],[11,"__iptr","","",24,null],[11,"default","","",24,{"inputs":[],"output":{"name":"union_unnamed10"}}],[11,"clone","","",25,null],[11,"default","","",25,{"inputs":[],"output":{"name":"struct_unnamed11"}}],[11,"clone","","",26,null],[11,"default","","",26,{"inputs":[],"output":{"name":"struct_unnamed12"}}],[11,"clone","","",27,null],[11,"default","","",27,{"inputs":[],"output":{"name":"struct_unnamed13"}}],[11,"clone","","",28,null],[11,"default","","",28,{"inputs":[],"output":{"name":"struct_unnamed14"}}],[11,"clone","","",29,null],[11,"default","","",29,{"inputs":[],"output":{"name":"struct_timespec"}}],[11,"clone","","",30,null],[11,"default","","",30,{"inputs":[],"output":{"name":"struct_timeval"}}],[11,"clone","","",31,null],[11,"default","","",31,{"inputs":[],"output":{"name":"struct_unnamed15"}}],[11,"clone","","",32,null],[11,"__size","","",32,null],[11,"__align","","",32,null],[11,"default","","",32,{"inputs":[],"output":{"name":"union_pthread_attr_t"}}],[11,"clone","","",33,null],[11,"default","","",33,{"inputs":[],"output":{"name":"struct___pthread_internal_list"}}],[11,"clone","","",34,null],[11,"__data","","",34,null],[11,"__size","","",34,null],[11,"__align","","",34,null],[11,"default","","",34,{"inputs":[],"output":{"name":"union_unnamed16"}}],[11,"clone","","",35,null],[11,"default","","",35,{"inputs":[],"output":{"name":"struct___pthread_mutex_s"}}],[11,"clone","","",36,null],[11,"__size","","",36,null],[11,"__align","","",36,null],[11,"default","","",36,{"inputs":[],"output":{"name":"union_unnamed17"}}],[11,"clone","","",37,null],[11,"__data","","",37,null],[11,"__size","","",37,null],[11,"__align","","",37,null],[11,"default","","",37,{"inputs":[],"output":{"name":"union_unnamed18"}}],[11,"clone","","",38,null],[11,"default","","",38,{"inputs":[],"output":{"name":"struct_unnamed19"}}],[11,"clone","","",39,null],[11,"__size","","",39,null],[11,"__align","","",39,null],[11,"default","","",39,{"inputs":[],"output":{"name":"union_unnamed20"}}],[11,"clone","","",40,null],[11,"__data","","",40,null],[11,"__size","","",40,null],[11,"__align","","",40,null],[11,"default","","",40,{"inputs":[],"output":{"name":"union_unnamed21"}}],[11,"clone","","",41,null],[11,"default","","",41,{"inputs":[],"output":{"name":"struct_unnamed22"}}],[11,"clone","","",42,null],[11,"__size","","",42,null],[11,"__align","","",42,null],[11,"default","","",42,{"inputs":[],"output":{"name":"union_unnamed23"}}],[11,"clone","","",43,null],[11,"__size","","",43,null],[11,"__align","","",43,null],[11,"default","","",43,{"inputs":[],"output":{"name":"union_unnamed24"}}],[11,"clone","","",44,null],[11,"__size","","",44,null],[11,"__align","","",44,null],[11,"default","","",44,{"inputs":[],"output":{"name":"union_unnamed25"}}],[11,"clone","","",45,null],[11,"default","","",45,{"inputs":[],"output":{"name":"struct_random_data"}}],[11,"clone","","",46,null],[11,"default","","",46,{"inputs":[],"output":{"name":"struct_drand48_data"}}],[11,"clone","","",47,null],[11,"default","","",47,{"inputs":[],"output":{"name":"struct___locale_struct"}}],[11,"clone","","",48,null],[11,"default","","",48,{"inputs":[],"output":{"name":"struct_unnamed26"}}],[11,"clone","","",49,null],[11,"__wch","","",49,null],[11,"__wchb","","",49,null],[11,"default","","",49,{"inputs":[],"output":{"name":"union_unnamed27"}}],[11,"clone","","",50,null],[11,"default","","",50,{"inputs":[],"output":{"name":"struct_unnamed28"}}],[11,"clone","","",51,null],[11,"default","","",51,{"inputs":[],"output":{"name":"struct_unnamed29"}}],[11,"clone","","",52,null],[11,"default","","",52,{"inputs":[],"output":{"name":"struct__io_marker"}}],[11,"clone","","",53,null],[11,"default","","",53,{"inputs":[],"output":{"name":"struct__io_file"}}],[11,"clone","","",54,null],[11,"default","","",54,{"inputs":[],"output":{"name":"struct_unnamed30"}}],[11,"clone","","",55,null],[11,"default","","",55,{"inputs":[],"output":{"name":"struct_unnamed31"}}],[11,"clone","","",56,null],[11,"default","","",56,{"inputs":[],"output":{"name":"struct_unnamed32"}}],[11,"clone","","",57,null],[11,"default","","",57,{"inputs":[],"output":{"name":"struct_unnamed33"}}],[11,"clone","","",58,null],[11,"default","","",58,{"inputs":[],"output":{"name":"struct_unnamed34"}}],[11,"clone","","",59,null],[11,"default","","",59,{"inputs":[],"output":{"name":"struct_unnamed35"}}],[11,"clone","","",60,null],[11,"default","","",60,{"inputs":[],"output":{"name":"struct_unnamed36"}}],[11,"clone","","",61,null],[11,"default","","",61,{"inputs":[],"output":{"name":"struct_unnamed37"}}],[11,"clone","","",62,null],[11,"i","","",62,null],[11,"f","","",62,null],[11,"default","","",62,{"inputs":[],"output":{"name":"union_unnamed38"}}],[11,"clone","","",63,null],[11,"default","","",63,{"inputs":[],"output":{"name":"struct_unnamed39"}}],[11,"clone","","",64,null],[11,"default","","",64,{"inputs":[],"output":{"name":"struct_unnamed40"}}],[11,"clone","","",65,null],[11,"default","","",65,{"inputs":[],"output":{"name":"struct___va_list_tag"}}],[0,"vcfutils","rust_htslib::htslib","",null,null],[5,"bcf_trim_alleles","rust_htslib::htslib::vcfutils","",null,null],[6,"BGZF","rust_htslib::htslib","",null,null],[6,"int8_t","","",null,null],[6,"int16_t","","",null,null],[6,"int32_t","","",null,null],[6,"int64_t","","",null,null],[6,"uint8_t","","",null,null],[6,"uint16_t","","",null,null],[6,"uint32_t","","",null,null],[6,"uint64_t","","",null,null],[6,"int_least8_t","","",null,null],[6,"int_least16_t","","",null,null],[6,"int_least32_t","","",null,null],[6,"int_least64_t","","",null,null],[6,"uint_least8_t","","",null,null],[6,"uint_least16_t","","",null,null],[6,"uint_least32_t","","",null,null],[6,"uint_least64_t","","",null,null],[6,"int_fast8_t","","",null,null],[6,"int_fast16_t","","",null,null],[6,"int_fast32_t","","",null,null],[6,"int_fast64_t","","",null,null],[6,"uint_fast8_t","","",null,null],[6,"uint_fast16_t","","",null,null],[6,"uint_fast32_t","","",null,null],[6,"uint_fast64_t","","",null,null],[6,"intptr_t","","",null,null],[6,"uintptr_t","","",null,null],[6,"intmax_t","","",null,null],[6,"uintmax_t","","",null,null],[6,"ptrdiff_t","","",null,null],[6,"size_t","","",null,null],[6,"wchar_t","","",null,null],[6,"kstring_t","","",null,null],[6,"Enum_htsFormatCategory","","",null,null],[6,"Enum_htsExactFormat","","",null,null],[6,"Enum_htsCompression","","",null,null],[6,"htsFormat","","",null,null],[6,"htsFile","","",null,null],[6,"Enum_sam_fields","","",null,null],[6,"Enum_cram_option","","",null,null],[6,"hts_idx_t","","",null,null],[6,"hts_pair64_t","","",null,null],[6,"hts_readrec_func","","",null,null],[6,"hts_itr_t","","",null,null],[6,"hts_name2id_f","","",null,null],[6,"hts_id2name_f","","",null,null],[6,"hts_itr_query_func","","",null,null],[6,"bam_hdr_t","","",null,null],[6,"bam1_core_t","","",null,null],[6,"bam1_t","","",null,null],[6,"samFile","","",null,null],[6,"bam_pileup1_t","","",null,null],[6,"bam_plp_auto_f","","",null,null],[6,"bam_plp_t","","",null,null],[6,"bam_mplp_t","","",null,null],[17,"HTS_FMT_BAI","","",null,null],[17,"unknown_category","","",null,null],[17,"sequence_data","","",null,null],[17,"variant_data","","",null,null],[17,"index_file","","",null,null],[17,"region_list","","",null,null],[17,"category_maximum","","",null,null],[17,"unknown_format","","",null,null],[17,"binary_format","","",null,null],[17,"text_format","","",null,null],[17,"sam","","",null,null],[17,"bam","","",null,null],[17,"bai","","",null,null],[17,"cram","","",null,null],[17,"crai","","",null,null],[17,"vcf","","",null,null],[17,"bcf","","",null,null],[17,"csi","","",null,null],[17,"gzi","","",null,null],[17,"tbi","","",null,null],[17,"bed","","",null,null],[17,"format_maximum","","",null,null],[17,"no_compression","","",null,null],[17,"gzip","","",null,null],[17,"bgzf","","",null,null],[17,"custom","","",null,null],[17,"compression_maximum","","",null,null],[17,"SAM_QNAME","","",null,null],[17,"SAM_FLAG","","",null,null],[17,"SAM_RNAME","","",null,null],[17,"SAM_POS","","",null,null],[17,"SAM_MAPQ","","",null,null],[17,"SAM_CIGAR","","",null,null],[17,"SAM_RNEXT","","",null,null],[17,"SAM_PNEXT","","",null,null],[17,"SAM_TLEN","","",null,null],[17,"SAM_SEQ","","",null,null],[17,"SAM_QUAL","","",null,null],[17,"SAM_AUX","","",null,null],[17,"SAM_RGAUX","","",null,null],[17,"CRAM_OPT_DECODE_MD","","",null,null],[17,"CRAM_OPT_PREFIX","","",null,null],[17,"CRAM_OPT_VERBOSITY","","",null,null],[17,"CRAM_OPT_SEQS_PER_SLICE","","",null,null],[17,"CRAM_OPT_SLICES_PER_CONTAINER","","",null,null],[17,"CRAM_OPT_RANGE","","",null,null],[17,"CRAM_OPT_VERSION","","",null,null],[17,"CRAM_OPT_EMBED_REF","","",null,null],[17,"CRAM_OPT_IGNORE_MD5","","",null,null],[17,"CRAM_OPT_REFERENCE","","",null,null],[17,"CRAM_OPT_MULTI_SEQ_PER_SLICE","","",null,null],[17,"CRAM_OPT_NO_REF","","",null,null],[17,"CRAM_OPT_USE_BZIP2","","",null,null],[17,"CRAM_OPT_SHARED_REF","","",null,null],[17,"CRAM_OPT_NTHREADS","","",null,null],[17,"CRAM_OPT_THREAD_POOL","","",null,null],[17,"CRAM_OPT_USE_LZMA","","",null,null],[17,"CRAM_OPT_USE_RANS","","",null,null],[17,"CRAM_OPT_REQUIRED_FIELDS","","",null,null],[0,"bam","rust_htslib","",null,null],[3,"Reader","rust_htslib::bam","A BAM reader.",null,null],[12,"header","","",66,null],[3,"IndexedReader","","",null,null],[12,"header","","",67,null],[3,"Writer","","A BAM writer.",null,null],[12,"header","","",68,null],[3,"Records","","Iterator over the records of a BAM.",null,null],[3,"HeaderView","","",null,null],[4,"ReadError","","",null,null],[13,"Truncated","","",69,null],[13,"Invalid","","",69,null],[13,"NoMoreRecord","","",69,null],[4,"IndexError","","",null,null],[13,"InvalidIndex","","",70,null],[13,"InvalidPath","","",70,null],[4,"BGZFError","","",null,null],[13,"InvalidPath","","",71,null],[0,"record","","",null,null],[3,"Record","rust_htslib::bam::record","A BAM record.",null,null],[12,"inner","","",72,null],[3,"Seq","","",null,null],[12,"encoded","","",73,null],[4,"Aux","","Auxiliary record data.",null,null],[13,"Integer","","",74,null],[13,"String","","",74,null],[13,"Float","","",74,null],[13,"Char","","",74,null],[4,"Cigar","","",null,null],[13,"Match","","",75,null],[13,"Ins","","",75,null],[13,"Del","","",75,null],[13,"RefSkip","","",75,null],[13,"SoftClip","","",75,null],[13,"HardClip","","",75,null],[13,"Pad","","",75,null],[13,"Equal","","",75,null],[13,"Diff","","",75,null],[13,"Back","","",75,null],[11,"new","","Create an empty BAM record.",72,{"inputs":[],"output":{"name":"self"}}],[11,"from_inner","","",72,null],[11,"tid","","Get target id.",72,null],[11,"set_tid","","Set target id.",72,null],[11,"pos","","Get position.",72,null],[11,"set_pos","","Set position.",72,null],[11,"bin","","",72,null],[11,"set_bin","","",72,null],[11,"mapq","","Get MAPQ.",72,null],[11,"set_mapq","","Set MAPQ.",72,null],[11,"flags","","Get raw flags.",72,null],[11,"set_flags","","Set raw flags.",72,null],[11,"unset_flags","","Unset all flags.",72,null],[11,"mtid","","Get target id of mate.",72,null],[11,"set_mtid","","Set target id of mate.",72,null],[11,"mpos","","Get mate position.",72,null],[11,"set_mpos","","Set mate position.",72,null],[11,"insert_size","","Get insert size.",72,null],[11,"set_insert_size","","Set insert size.",72,null],[11,"qname","","Get qname (read name).",72,null],[11,"set","","Set variable length data (qname, cigar, seq, qual).",72,null],[11,"cigar","","Get cigar sequence.",72,null],[11,"seq","","Get read sequence.",72,null],[11,"qual","","Get base qualities.",72,null],[11,"aux","","Get auxiliary data (tags).",72,null],[11,"push_aux","","Add auxiliary data.",72,null],[11,"is_paired","","",72,null],[11,"set_paired","","",72,null],[11,"is_proper_pair","","",72,null],[11,"set_proper_pair","","",72,null],[11,"is_unmapped","","",72,null],[11,"set_unmapped","","",72,null],[11,"is_mate_unmapped","","",72,null],[11,"set_mate_unmapped","","",72,null],[11,"is_reverse","","",72,null],[11,"set_reverse","","",72,null],[11,"is_mate_reverse","","",72,null],[11,"set_mate_reverse","","",72,null],[11,"is_first_in_pair","","",72,null],[11,"set_first_in_pair","","",72,null],[11,"is_second_in_pair","","",72,null],[11,"set_second_in_pair","","",72,null],[11,"is_secondary","","",72,null],[11,"set_secondary","","",72,null],[11,"is_quality_check_failed","","",72,null],[11,"set_quality_check_failed","","",72,null],[11,"is_duplicate","","",72,null],[11,"set_duplicate","","",72,null],[11,"is_supplementary","","",72,null],[11,"set_supplementary","","",72,null],[11,"drop","","",72,null],[11,"fmt","","",74,null],[11,"eq","","",74,null],[11,"ne","","",74,null],[11,"string","","Get string from aux data (panics if not a string).",74,null],[11,"float","","",74,null],[11,"integer","","",74,null],[11,"char","","",74,null],[11,"encoded_base","","",73,null],[11,"as_bytes","","",73,null],[11,"len","","",73,null],[11,"index","","",73,null],[11,"fmt","","",75,null],[11,"eq","","",75,null],[11,"ne","","",75,null],[0,"header","rust_htslib::bam","",null,null],[3,"Header","rust_htslib::bam::header","A BAM header.",null,null],[3,"HeaderRecord","","Header record.",null,null],[11,"new","","Create a new header.",76,{"inputs":[],"output":{"name":"self"}}],[11,"push_record","","Add a record to the header.",76,null],[11,"push_comment","","Add a comment to the header.",76,null],[11,"to_bytes","","",76,null],[11,"new","","Create a new header record.\nSee SAM format specification for possible record types.",77,null],[11,"push_tag","","Add a new tag to the record.",77,null],[0,"pileup","rust_htslib::bam","",null,null],[3,"Pileup","rust_htslib::bam::pileup","A pileup over one genomic position.",null,null],[3,"Alignment","","An aligned read in a pileup.",null,null],[3,"Pileups","","Iterator over pileups.",null,null],[4,"Indel","","",null,null],[13,"Ins","","",78,null],[13,"Del","","",78,null],[13,"None","","",78,null],[6,"Alignments","","Iterator over alignments of a pileup.",null,null],[11,"tid","","",79,null],[11,"pos","","",79,null],[11,"depth","","",79,null],[11,"alignments","","",79,null],[11,"new","","",80,{"inputs":[{"name":"bam_pileup1_t"}],"output":{"name":"self"}}],[11,"qpos","","Position within the read.",80,null],[11,"indel","","Insertion, deletion (with length) or None if no indel.",80,null],[11,"record","","The corresponding record.",80,null],[11,"eq","","",78,null],[11,"ne","","",78,null],[11,"fmt","","",78,null],[11,"new","","",81,{"inputs":[{"name":"bam_plp_t"}],"output":{"name":"self"}}],[11,"set_max_depth","","",81,null],[11,"next","","",81,null],[11,"drop","","",81,null],[8,"Read","rust_htslib::bam","A trait for a BAM reader with a read method.",null,null],[10,"read","","Read next BAM record into given record.\nUse this method in combination with a single allocated record to avoid the reallocations\noccurring with the iterator.",82,null],[10,"records","","Iterator over the records of the seeked region.\nNote that, while being convenient, this is less efficient than pre-allocating a\n`Record` and reading into it with the `read` method, since every iteration involves\nthe allocation of a new `Record`.",82,null],[10,"pileup","","Iterator over pileups.",82,null],[10,"bgzf","","Return the BGZF struct",82,null],[11,"new","","Create a new Reader.",66,{"inputs":[{"name":"p"}],"output":{"name":"result"}}],[11,"read","","",66,null],[11,"records","","Iterator over the records of the seeked region.\nNote that, while being convenient, this is less efficient than pre-allocating a\n`Record` and reading into it with the `read` method, since every iteration involves\nthe allocation of a new `Record`.",66,null],[11,"pileup","","",66,null],[11,"bgzf","","",66,null],[11,"drop","","",66,null],[11,"new","","Create a new Reader.",67,{"inputs":[{"name":"p"}],"output":{"name":"result"}}],[11,"seek","","",67,null],[11,"read","","",67,null],[11,"records","","Iterator over the records of the seeked region.\nNote that, while being convenient, this is less efficient than pre-allocating a\n`Record` and reading into it with the `read` method, since every iteration involves\nthe allocation of a new `Record`.",67,null],[11,"pileup","","",67,null],[11,"bgzf","","",67,null],[11,"drop","","",67,null],[11,"new","","Create a new BAM file.",68,{"inputs":[{"name":"p"},{"name":"header"}],"output":{"name":"result"}}],[11,"with_template","","Create a new BAM file from template.",68,{"inputs":[{"name":"t"},{"name":"p"}],"output":{"name":"result"}}],[11,"write","","Write record to BAM.",68,null],[11,"drop","","",68,null],[11,"next","","",83,null],[11,"tid","","",84,null],[11,"target_count","","",84,null],[11,"target_names","","",84,null],[11,"target_len","","",84,null],[0,"bcf","rust_htslib","",null,null],[3,"Reader","rust_htslib::bcf","",null,null],[12,"header","","",85,null],[3,"Writer","","",null,null],[12,"header","","",86,null],[3,"Records","","",null,null],[4,"BCFError","","",null,null],[13,"InvalidPath","","",87,null],[4,"ReadError","","",null,null],[13,"Invalid","","",88,null],[13,"NoMoreRecord","","",88,null],[0,"record","","",null,null],[3,"Record","rust_htslib::bcf::record","",null,null],[12,"inner","","",89,null],[12,"header","","",89,null],[3,"Info","","",null,null],[3,"Format","","",null,null],[4,"TagError","","",null,null],[13,"UndefinedTag","","",90,null],[13,"UnexpectedType","","",90,null],[13,"MissingTag","","",90,null],[17,"MISSING_INTEGER","","",null,null],[17,"MISSING_FLOAT","","",null,null],[17,"VECTOR_END_INTEGER","","",null,null],[17,"VECTOR_END_FLOAT","","",null,null],[11,"new","","",89,{"inputs":[],"output":{"name":"self"}}],[11,"rid","","",89,null],[11,"pos","","",89,null],[11,"set_pos","","",89,null],[11,"alleles","","",89,null],[11,"qual","","",89,null],[11,"set_qual","","",89,null],[11,"info","","Get the value of the given info tag.",89,null],[11,"sample_count","","",89,null],[11,"allele_count","","",89,null],[11,"format","","Get the value of the given format tag for each sample.",89,null],[11,"push_format_integer","","Add an integer format tag. Data is a flattened two-dimensional array.\nThe first dimension contains one array for each sample.\nReturns error if tag is not present in header.",89,null],[11,"push_format_float","","Add a float format tag. Data is a flattened two-dimensional array.\nThe first dimension contains one array for each sample.\nReturns error if tag is not present in header.",89,null],[11,"push_info","","Add a info tag.",89,null],[11,"trim_alleles","","Remove unused alleles.",89,null],[11,"drop","","",89,null],[11,"integer","","",91,null],[11,"integer_mut","","",91,null],[11,"float","","",91,null],[11,"float_mut","","",91,null],[11,"flag","","",91,null],[11,"string","","",91,null],[11,"string_mut","","",91,null],[11,"integer","","",92,null],[11,"integer_mut","","",92,null],[11,"float","","",92,null],[11,"float_mut","","",92,null],[11,"string","","",92,null],[11,"string_mut","","",92,null],[11,"fmt","","",90,null],[0,"header","rust_htslib::bcf","",null,null],[3,"Header","rust_htslib::bcf::header","A BCF header.",null,null],[12,"inner","","",93,null],[12,"subset","","",93,null],[3,"HeaderView","","",null,null],[12,"inner","","",94,null],[6,"SampleSubset","","",null,null],[11,"new","","Create a new header.",93,{"inputs":[],"output":{"name":"self"}}],[11,"with_template","","",93,{"inputs":[{"name":"headerview"}],"output":{"name":"self"}}],[11,"subset_template","","",93,null],[11,"push_sample","","",93,null],[11,"push_record","","Add a record to the header.",93,null],[11,"remove_info","","",93,null],[11,"remove_format","","",93,null],[11,"drop","","",93,null],[11,"new","","",94,null],[11,"sample_count","","",94,null],[11,"samples","","",94,null],[11,"rid2name","","",94,null],[11,"new","rust_htslib::bcf","",85,{"inputs":[{"name":"p"}],"output":{"name":"result"}}],[11,"read","","",85,null],[11,"records","","",85,null],[11,"drop","","",85,null],[11,"new","","",86,{"inputs":[{"name":"p"},{"name":"header"},{"name":"bool"},{"name":"bool"}],"output":{"name":"result"}}],[11,"translate","","Translate record to header of this writer.",86,null],[11,"subset","","Subset samples of record to match header of this writer.",86,null],[11,"write","","",86,null],[11,"drop","","",86,null],[11,"next","","",95,null],[0,"utils","rust_htslib","",null,null],[5,"copy_memory","rust_htslib::utils","Copies data from `src` to `dst`\nTODO remove once stable in standard library.",null,null],[5,"path_to_cstring","","",null,{"inputs":[{"name":"p"}],"output":{"name":"option"}}]],"paths":[[3,"Struct___kstring_t"],[3,"Struct_htsFormat"],[3,"Struct_Unnamed1"],[3,"Struct_Unnamed2"],[3,"Union_Unnamed3"],[3,"Struct_Unnamed4"],[3,"Struct_Unnamed5"],[3,"Struct_Unnamed6"],[3,"Struct_Unnamed7"],[3,"Struct_Unnamed8"],[3,"Struct_Unnamed9"],[3,"Struct_Unnamed10"],[3,"Struct___kstring_t"],[3,"Struct_htsFormat"],[3,"Struct_Unnamed1"],[3,"Struct_Unnamed2"],[3,"Union_Unnamed3"],[3,"Struct_Unnamed4"],[3,"Struct_Unnamed5"],[3,"Struct_Unnamed6"],[3,"Struct_Unnamed7"],[3,"Union_wait"],[3,"Struct_Unnamed8"],[3,"Struct_Unnamed9"],[3,"Union_Unnamed10"],[3,"Struct_Unnamed11"],[3,"Struct_Unnamed12"],[3,"Struct_Unnamed13"],[3,"Struct_Unnamed14"],[3,"Struct_timespec"],[3,"Struct_timeval"],[3,"Struct_Unnamed15"],[3,"Union_pthread_attr_t"],[3,"Struct___pthread_internal_list"],[3,"Union_Unnamed16"],[3,"Struct___pthread_mutex_s"],[3,"Union_Unnamed17"],[3,"Union_Unnamed18"],[3,"Struct_Unnamed19"],[3,"Union_Unnamed20"],[3,"Union_Unnamed21"],[3,"Struct_Unnamed22"],[3,"Union_Unnamed23"],[3,"Union_Unnamed24"],[3,"Union_Unnamed25"],[3,"Struct_random_data"],[3,"Struct_drand48_data"],[3,"Struct___locale_struct"],[3,"Struct_Unnamed26"],[3,"Union_Unnamed27"],[3,"Struct_Unnamed28"],[3,"Struct_Unnamed29"],[3,"Struct__IO_marker"],[3,"Struct__IO_FILE"],[3,"Struct_Unnamed30"],[3,"Struct_Unnamed31"],[3,"Struct_Unnamed32"],[3,"Struct_Unnamed33"],[3,"Struct_Unnamed34"],[3,"Struct_Unnamed35"],[3,"Struct_Unnamed36"],[3,"Struct_Unnamed37"],[3,"Union_Unnamed38"],[3,"Struct_Unnamed39"],[3,"Struct_Unnamed40"],[3,"Struct___va_list_tag"],[3,"Reader"],[3,"IndexedReader"],[3,"Writer"],[4,"ReadError"],[4,"IndexError"],[4,"BGZFError"],[3,"Record"],[3,"Seq"],[4,"Aux"],[4,"Cigar"],[3,"Header"],[3,"HeaderRecord"],[4,"Indel"],[3,"Pileup"],[3,"Alignment"],[3,"Pileups"],[8,"Read"],[3,"Records"],[3,"HeaderView"],[3,"Reader"],[3,"Writer"],[4,"BCFError"],[4,"ReadError"],[3,"Record"],[4,"TagError"],[3,"Info"],[3,"Format"],[3,"Header"],[3,"HeaderView"],[3,"Records"]]}; initSearch(searchIndex);