[−][src]Module needletail::sequence
Generic functions for working with (primarily nucleic acid) sequences
Traits
| QualitySequence | [⚠️Unstable] A trait to wrap over sequence data that has associated quality information. |
| Sequence | A generic FASTX record that also abstracts over several logical operations that can be performed on nucleic acid sequences. |
Functions
| canonical | Taking in a sequence string, return the canonical form of the sequence (e.g. the lexigraphically lowest of either the original sequence or its reverse complement) |
| complement | Returns the complementary base for a given IUPAC base code. |
| minimizer | Find the lexigraphically smallest substring of |
| normalize | Transform a nucleic acid sequence into its "normalized" form. |