Crate kmer_lookup

Functions

make_kmer_lookup_12_single	Included for backward compatibility. Use make_kmer_lookup_single
make_kmer_lookup_12_single_simple	Included for backward compatibility. Use make_kmer_lookup_single_simple
make_kmer_lookup_20_oriented_single
make_kmer_lookup_20_parallel
make_kmer_lookup_20_single	Included for backward compatibility. Use make_kmer_lookup_single
make_kmer_lookup_20_single_simple	Included for backward compatibility. Use make_kmer_lookup_single_simple
make_kmer_lookup_oriented_single
make_kmer_lookup_single	Given a vector of DnaStrings dv, create a sorted vector whose entries are (kmer, e, estart), where the kmer starts at position estart on dv[e].
make_kmer_lookup_single_simple	Just create a unique sorted vector of kmers.
match_12