Module debruijn::graph

Containers for path-compressed De Bruijn graphs

Structs

BaseGraph	A compressed DeBruijn graph carrying auxiliary data on each node of type D. This type does not carry the sorted index arrays the allow the graph to be walked efficiently. The DeBruijnGraph type wraps this type and add those vectors.
DebruijnGraph	A compressed DeBruijn graph carrying auxiliary data on each node of type D. The struct carries sorted index arrays the allow the graph to be walked efficiently.
Node	Unbranched sequence in the DeBruijn graph
NodeIntoIter	Iterator over nodes in a DeBruijnGraph
NodeIter	Iterator over nodes in a DeBruijnGraph
NodeKmer	A DebruijnGraph node with a reference to the sequence of the node.
NodeKmerIter	An iterator over the kmers in a DeBruijn graph node