List of all items
Structs
- implementation::alphabets::ascii_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::ascii_alphabet::AsciiAlphabet
- implementation::alphabets::ascii_alphabet::AsciiCharacter
- implementation::alphabets::dna_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::dna_alphabet::DnaAlphabet
- implementation::alphabets::dna_alphabet::DnaCharacter
- implementation::alphabets::dna_alphabet_or_n::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::dna_alphabet_or_n::DnaAlphabetOrN
- implementation::alphabets::dna_alphabet_or_n::DnaCharacterOrN
- implementation::alphabets::dna_iupac_nucleic_acid_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::dna_iupac_nucleic_acid_alphabet::DnaIupacNucleicAcidAlphabet
- implementation::alphabets::dna_iupac_nucleic_acid_alphabet::DnaIupacNucleicAcidCharacter
- implementation::alphabets::famsa_amino_acid_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::famsa_amino_acid_alphabet::FamsaAminoAcidAlphabet
- implementation::alphabets::famsa_amino_acid_alphabet::FamsaAminoAcidCharacter
- implementation::alphabets::generic_alphabet::GenericAlphabet
- implementation::alphabets::generic_alphabet::GenericCharacter
- implementation::alphabets::iupac_amino_acid_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::iupac_amino_acid_alphabet::IupacAminoAcidAlphabet
- implementation::alphabets::iupac_amino_acid_alphabet::IupacAminoAcidCharacter
- implementation::alphabets::rna_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::rna_alphabet::RnaAlphabet
- implementation::alphabets::rna_alphabet::RnaCharacter
- implementation::alphabets::rna_alphabet_or_n::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::rna_alphabet_or_n::RnaAlphabetOrN
- implementation::alphabets::rna_alphabet_or_n::RnaCharacterOrN
- implementation::alphabets::rna_iupac_nucleic_acid_alphabet::AlphabetCharacterFromToAsciiTable
- implementation::alphabets::rna_iupac_nucleic_acid_alphabet::RnaIupacNucleicAcidAlphabet
- implementation::alphabets::rna_iupac_nucleic_acid_alphabet::RnaIupacNucleicAcidCharacter
- implementation::array_kmer::ArrayKmer
- implementation::bit_array_kmer::BitArrayKmer
- implementation::bit_vec_sequence::BitVectorGenome
- implementation::bit_vec_sequence::BitVectorGenomeIterator
- implementation::bit_vec_sequence::BitVectorSubGenome
- implementation::bit_vec_sequence::BitVectorSubGenomeIterator
- implementation::bit_vec_sequence_store::BitVectorSequenceStore
- implementation::bit_vec_sequence_store::BitVectorSequenceStoreHandle
- implementation::handle_sequence_store::HandleSequenceStore
- implementation::vec_sequence::SliceSubGenome
- implementation::vec_sequence::VectorGenome
- implementation::vec_sequence_store::VectorSequenceStore
- implementation::vec_sequence_store::VectorSequenceStoreHandle
- interface::sequence::neighbor_iterators::SubstitutionDistanceOneNeighborIterator
Enums
Traits
- implementation::alphabets::generic_alphabet::CharacterFromToAsciiTable
- implementation::bit_array_kmer::BitStore
- implementation::bit_array_kmer::BitView
- implementation::bit_array_kmer::BitViewSized
- interface::alphabet::Alphabet
- interface::alphabet::AlphabetCharacter
- interface::k_mer::Kmer
- interface::k_mer::KmerMut
- interface::k_mer::OwnedKmer
- interface::sequence::EditableGenomeSequence
- interface::sequence::GenomeSequence
- interface::sequence::GenomeSequenceMut
- interface::sequence::OwnedGenomeSequence
- interface::sequence_store::HandleWithLength
- interface::sequence_store::HandleWithSubsequence
- interface::sequence_store::InverseMappingSequenceStore
- interface::sequence_store::SequenceStore