List of all items

Structs

• gtdb::ReleaseInfo
• gtdb::SubVersionInfo
• taxo::Taxonomy
• tree::Node

Enums

• gtdb::DomainFile

Functions

• db::batch_insert_gtdb_tree
• db::batch_insert_taxonomy
• db::create_genome_taxonomy_table
• db::create_gtdb_tree_tables
• db::create_tables
• db::update_gtdb_tree_species
• generate::generate_newick_tree
• generate::process_data
• gtdb::download_gtdb_data
• gtdb::get_sub_version_files
• gtdb::list_releases
• gtdb::parse_domain_files
• gtdb::parse_metadata
• gtdb::parse_tree
• ncbi::load
• ncbi::print_taxonomy_summary
• taxo::prune_taxonomy
• taxo::prune_taxonomy_by_names
• taxo::taxonomy_to_newick
• tree::_build_pruned_tree
• tree::build_pruned_tree
• tree::get_leaf_nodes_by_rank
• tree::write_node_to_newick
• update::update_taxdump
• utils::download_file