Struct bio::io::gff::Record

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pub struct Record { /* private fields */ }

Expand description

A GFF record

Implementations

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impl Record

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pub fn new() -> Self

Create a new GFF record.

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pub fn seqname(&self) -> &str

Sequence name of the feature.

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pub fn source(&self) -> &str

Source of the feature.

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pub fn feature_type(&self) -> &str

Type of the feature.

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pub fn start(&self) -> &u64

Start position of feature (1-based).

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pub fn end(&self) -> &u64

End position of feature (1-based, not included).

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pub fn score(&self) -> Option<u64>

Score of feature

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pub fn strand(&self) -> Option<Strand>

Strand of the feature.

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pub fn frame(&self) -> &str

Frame of the feature.

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pub fn attributes(&self) -> &MultiMap<String, String>

Attribute of feature

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pub fn seqname_mut(&mut self) -> &mut String

Get mutable reference on seqname of feature.

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pub fn source_mut(&mut self) -> &mut String

Get mutable reference on source of feature.

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pub fn feature_type_mut(&mut self) -> &mut String

Get mutable reference on type of feature.

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pub fn start_mut(&mut self) -> &mut u64

Get mutable reference on start of feature.

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pub fn end_mut(&mut self) -> &mut u64

Get mutable reference on end of feature.

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pub fn score_mut(&mut self) -> &mut String

Get mutable reference on score of feature.

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pub fn strand_mut(&mut self) -> &mut String

Get mutable reference on strand of feature.

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pub fn frame_mut(&mut self) -> &mut String

Get mutable reference on frame of feature.

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pub fn attributes_mut(&mut self) -> &mut MultiMap<String, String>

Get mutable reference on attributes of feature.

Trait Implementations

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impl Clone for Record

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fn clone(&self) -> Record

Returns a copy of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

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impl Debug for Record

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl Default for Record

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fn default() -> Record

Returns the “default value” for a type. Read more

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impl<'de> Deserialize<'de> for Record

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fn deserialize<D>(deserializer: D) -> Result<Self, D::Error> where
__D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer. Read more

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impl Serialize for Record

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fn serialize<S>(&self, serializer: S) -> Result<S::Ok, S::Error> where
S: Serializer,

Serialize this value into the given Serde serializer. Read more

Auto Trait Implementations

impl RefUnwindSafe for Record

impl Send for Record

impl Sync for Record

impl Unpin for Record

impl UnwindSafe for Record

Blanket Implementations

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impl<T> Any for T where
T: 'static + ?Sized,

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pub fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T where
T: ?Sized,

const: unstable · source

pub fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T where
T: ?Sized,

const: unstable · source

pub fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> From<T> for T

const: unstable · source

pub fn from(t: T) -> T

Performs the conversion.

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impl<T, U> Into for T where
U: From<T>,

const: unstable · source

pub fn into(self) -> U

Performs the conversion.

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impl<T> Same<T> for T

type Output = T

Should always be Self

impl<SS, SP> SupersetOf<SS> for SP where
SS: SubsetOf<SP>,

pub fn to_subset(&self) -> Option<SS>

The inverse inclusion map: attempts to construct self from the equivalent element of its superset. Read more

pub fn is_in_subset(&self) -> bool

Checks if self is actually part of its subset T (and can be converted to it).

pub fn to_subset_unchecked(&self) -> SS

Use with care! Same as self.to_subset but without any property checks. Always succeeds.

pub fn from_subset(element: &SS) -> SP

The inclusion map: converts self to the equivalent element of its superset.

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impl<T> ToOwned for T where
T: Clone,

type Owned = T

The resulting type after obtaining ownership.

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pub fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more

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pub fn clone_into(&self, target: &mut T)

🔬 This is a nightly-only experimental API. (toowned_clone_into)

Uses borrowed data to replace owned data, usually by cloning. Read more

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impl<T, U> TryFrom for T where
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

const: unstable · source

pub fn try_from(value: U) -> Result<T, <T as TryFrom>::Error>

Performs the conversion.

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impl<T, U> TryInto for T where
U: TryFrom<T>,

type Error = >::Error

The type returned in the event of a conversion error.

const: unstable · source

pub fn try_into(self) -> Result<U, >::Error>

Performs the conversion.

impl<V, T> VZip<V> for T where
V: MultiLane<T>,

pub fn vzip(self) -> V

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Struct bio::io::gff::Record

Implementations

impl Record

pub fn new() -> Self

pub fn seqname(&self) -> &str

pub fn source(&self) -> &str

pub fn feature_type(&self) -> &str

pub fn start(&self) -> &u64

pub fn end(&self) -> &u64

pub fn score(&self) -> Option<u64>

pub fn strand(&self) -> Option<Strand>

pub fn frame(&self) -> &str

pub fn attributes(&self) -> &MultiMap<String, String>

pub fn seqname_mut(&mut self) -> &mut String

pub fn source_mut(&mut self) -> &mut String

pub fn feature_type_mut(&mut self) -> &mut String

pub fn start_mut(&mut self) -> &mut u64

pub fn end_mut(&mut self) -> &mut u64

pub fn score_mut(&mut self) -> &mut String

pub fn strand_mut(&mut self) -> &mut String

pub fn frame_mut(&mut self) -> &mut String

pub fn attributes_mut(&mut self) -> &mut MultiMap<String, String>

Trait Implementations

impl Clone for Record

fn clone(&self) -> Record

fn clone_from(&mut self, source: &Self)

impl Debug for Record

fn fmt(&self, f: &mut Formatter<'_>) -> Result

impl Default for Record

fn default() -> Record

impl<'de> Deserialize<'de> for Record

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error> where __D: Deserializer<'de>,

impl Serialize for Record

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error> where __S: Serializer,

Auto Trait Implementations

impl RefUnwindSafe for Record

impl Send for Record

impl Sync for Record

impl Unpin for Record

impl UnwindSafe for Record

Blanket Implementations

impl<T> Any for T where T: 'static + ?Sized,

pub fn type_id(&self) -> TypeId

impl<T> Borrow<T> for T where T: ?Sized,

pub fn borrow(&self) -> &T

impl<T> BorrowMut<T> for T where T: ?Sized,

pub fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

pub fn from(t: T) -> T

impl<T, U> Into<U> for T where U: From<T>,

pub fn into(self) -> U

impl<T> Same<T> for T

type Output = T

impl<SS, SP> SupersetOf<SS> for SP where SS: SubsetOf<SP>,

pub fn to_subset(&self) -> Option<SS>

pub fn is_in_subset(&self) -> bool

pub fn to_subset_unchecked(&self) -> SS

pub fn from_subset(element: &SS) -> SP

impl<T> ToOwned for T where T: Clone,

type Owned = T

pub fn to_owned(&self) -> T

pub fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for T where U: Into<T>,

type Error = Infallible

pub fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for T where U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

pub fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

impl<V, T> VZip<V> for T where V: MultiLane<T>,

pub fn vzip(self) -> V

impl<T> DeserializeOwned for T where T: for<'de> Deserialize<'de>,

fn deserialize<D>(deserializer: D) -> Result<Self, D::Error> where
__D: Deserializer<'de>,

fn serialize<S>(&self, serializer: S) -> Result<S::Ok, S::Error> where
S: Serializer,

impl<T> Any for T where
T: 'static + ?Sized,

impl<T> Borrow<T> for T where
T: ?Sized,

impl<T> BorrowMut<T> for T where
T: ?Sized,

impl<T, U> Into<U> for T where
U: From<T>,

impl<SS, SP> SupersetOf<SS> for SP where
SS: SubsetOf<SP>,

impl<T> ToOwned for T where
T: Clone,

impl<T, U> TryFrom<U> for T where
U: Into<T>,

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,

impl<V, T> VZip<V> for T where
V: MultiLane<T>,

impl<T> DeserializeOwned for T where
T: for<'de> Deserialize<'de>,