Struct bio::alignment::pairwise::TracebackCell
source · pub struct TracebackCell { /* private fields */ }
Expand description
Packed representation of one cell of a Smith-Waterman traceback matrix. Stores the I, D and S traceback matrix values in two bytes. Possible traceback moves include : start, insert, delete, match, substitute, prefix clip and suffix clip for x & y. So we need 4 bits each for matrices I, D, S to keep track of these 9 moves.
Implementations
sourceimpl TracebackCell
impl TracebackCell
sourcepub fn new() -> TracebackCell
pub fn new() -> TracebackCell
Initialize a blank traceback cell
pub fn set_i_bits(&mut self, value: u16)
pub fn set_d_bits(&mut self, value: u16)
pub fn set_s_bits(&mut self, value: u16)
pub fn get_i_bits(&self) -> u16
pub fn get_d_bits(&self) -> u16
pub fn get_s_bits(&self) -> u16
Trait Implementations
sourceimpl Clone for TracebackCell
impl Clone for TracebackCell
sourcefn clone(&self) -> TracebackCell
fn clone(&self) -> TracebackCell
Returns a copy of the value. Read more
1.0.0 · sourcefn clone_from(&mut self, source: &Self)
fn clone_from(&mut self, source: &Self)
Performs copy-assignment from
source
. Read moresourceimpl Default for TracebackCell
impl Default for TracebackCell
impl Copy for TracebackCell
Auto Trait Implementations
impl RefUnwindSafe for TracebackCell
impl Send for TracebackCell
impl Sync for TracebackCell
impl Unpin for TracebackCell
impl UnwindSafe for TracebackCell
Blanket Implementations
sourceimpl<T> BorrowMut<T> for Twhere
T: ?Sized,
impl<T> BorrowMut<T> for Twhere
T: ?Sized,
const: unstable · sourcefn borrow_mut(&mut self) -> &mut T
fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more