Crate bio_io

Structs

• BamChunk

Enums

• PbChem

Functions

• bam_reader
  Open bam file
• buffer_from
  a reader that can read compressed files but also stdin (indicated by -)
• find_pb_polymerase
• get_f32_tag
• get_pb_u16_tag_as_u8
  Convert the PacBio u16 tag into the u8 tag we normally expect.
• get_u8_tag
• get_u32_tag
• no_length_progress_bar
• program_bam_writer
  Write to a bam file.
• write_to_file
  write to a file, but don’t error on broken pipes
• writer
  Write normal or compressed files seamlessly Uses the presence of a .gz extension to decide